FFCP PHASE1:Hg19::chr11:36310869..36310878,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:36310869..36310878,- | |||
|description=CAGE_peak_at_chr11:36310869..36310878,- | |description=CAGE_peak_at_chr11:36310869..36310878,- | ||
|id=chr11:36310869..36310878,- | |id=chr11:36310869..36310878,- | ||
|ontology_enrichment_celltype=CL:0000066!6.57e-23!254;CL:0002076!6.28e-14!43;CL:0000223!3.60e-13!59;CL:0002251!7.39e-09!21 | |ontology_enrichment_celltype=CL:0000066!6.57e-23!254;CL:0002076!6.28e-14!43;CL:0000223!3.60e-13!59;CL:0002251!7.39e-09!21 | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.72e-17;2!CL:0002577;2.76e-12;3!CL:0000039;2.01e-11;7!CL:0000586;2.01e-11;7!CL:0000313;1.30e-09;1!CL:0002563;3.29e-09;4!CL:0002322;1.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.41e-17,2;CL:0002577,2.03e-12,3;CL:0000039,1.51e-11,7;CL:0000586,1.51e-11,7;CL:0000313,6.88e-10,1;CL:0002563,3.89e-09,4;CL:0002322,1.46e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.82e-08;10!UBERON:0005564;3.82e-08;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.69e-25!143;DOID:305!6.69e-24!106;DOID:14566!1.83e-19!239;DOID:162!2.43e-19!235;DOID:299!1.31e-07!25 | |ontology_enrichment_disease=DOID:0050687!5.69e-25!143;DOID:305!6.69e-24!106;DOID:14566!1.83e-19!239;DOID:162!2.43e-19!235;DOID:299!1.31e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;1.93e-11;25!DOID:3151;1.30e-09;1!DOID:2152;1.30e-09;1!DOID:3149;1.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.09e-11,25;DOID:2152,6.88e-10,1;DOID:3151,1.48e-09,1;DOID:3149,1.48e-09,1;DOID:305,1.18e-07,106;DOID:0050687,1.46e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.83e-13!169;UBERON:0000925!9.83e-13!169;UBERON:0006595!9.83e-13!169;UBERON:0001007!6.60e-10!155;UBERON:0001555!6.60e-10!155;UBERON:0007026!6.60e-10!155;UBERON:0004921!3.91e-09!129;UBERON:0004185!3.91e-09!129;UBERON:0001004!6.30e-09!72;UBERON:0000077!1.68e-07!130;UBERON:0000065!6.85e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.30e-09;1!UBERON:0001987;1.95e-09;4!UBERON:0001052;3.29e-09;4!UBERON:0001242;3.29e-09;4!UBERON:0001262;3.29e-09;4!UBERON:0004786;3.29e-09;4!UBERON:0004808;3.29e-09;4!UBERON:0001277;3.29e-09;4!UBERON:0004907;1.55e-07;5!UBERON:0000474;3.50e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,3.64e-10,48;UBERON:0004911,6.88e-10,1;UBERON:0000995,9.35e-10,21;UBERON:0001987,1.55e-09,4;UBERON:0004340,1.55e-09,4;UBERON:0005795,2.64e-09,22;UBERON:0003975,2.64e-09,22;UBERON:0001052,3.89e-09,4;UBERON:0001242,3.89e-09,4;UBERON:0001262,3.89e-09,4;UBERON:0004786,3.89e-09,4;UBERON:0004808,3.89e-09,4;UBERON:0001277,3.89e-09,4;UBERON:0004175,3.63e-08,25;UBERON:0005156,4.49e-08,59;UBERON:0000990,4.49e-08,59;UBERON:0003134,1.18e-07,37;UBERON:0000474,1.18e-07,37;UBERON:0004907,1.77e-07,5;UBERON:0003100,7.38e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,1.09220686065086,0.263766978228454,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.369754010166788,0.232401601740905,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0.622422070799533,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0.365921118388786,1.19276791489337,0.464775771478074,0.621966330092223,1.7662459561294,1.82488679537915,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.110293972732394,0.653638332277218,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.860919069801795,0.171567810298526,0.329250856225877,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,3.32870879020994,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0.40101294060657,0.276242966807689,0,0,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0,0,0,0,0,0.812839312631559,0.501689773854853,0.764628819135115,0,0.223874754722178,0,0,0.512900250232778,0,0,0.206082023295445,0.0915694648183434,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.576570202095319,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.288666338176536,0,0,0.188287601553558,1.72202149068492,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0,0.890894042497916,0.307160702099232,0,0,0,0,0.211125408127993,0,0,1.0077309914171,0.20453736500431,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.435753854075961,0.83654246567162,0,0,0.922255617552241,1.34636466614658,0.217294743844016,0.31900115973192,0,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0,0,0,0.163232808159148,1.41353071433941,1.08194319871046,0,0,0.611030144933625,0,0,0,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0.30607276163049,0,0.300646838828985,0.207376382794494,0,0,0,0,1.13843818411917,0.138674673013139,0.694238953340524,0,0.174118413160805,0.17472666824203,0,0,0.0730893170861856,0.246346371159628,0.0969890164884194,0.0882561266915003,0.225980740780532,0.274083849293502,0,0,0.195551382734803,0.0801588202515337,0,0.799238438328521,0.288180834308212,0.343609788497747,0.171594997861965,0.14405479798815,0.124252535565433,0.471388069233591,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,0.236349546921671,0.247247575143499,0.337017719270924,0,0.254019996197353,0,0.136203406111576,0.964518890790115,0.687697182986169,2.49264202817511,0,0,0.0607495566580247,1.34173875039706,0,0.314727528809989,0.316801009558219,0.179287339332845,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0.340776043570843,0.226624183040251,0,0,0,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0.303298235083296,0.285465333544967,0,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0,0,3.06946491128764,0.107824811396682,0.314531883711793,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,0.808679663052368,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0.126831620387814,0,0.548257766857182,0,0,0.511049710558381,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0.236387681767936,0.333694205676207,0,0,0.280272163313789,0,0,0.47775168788705,0,2.05417695252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| ||
|short_description=p@chr11:36310869..36310878,- | |short_description=p@chr11:36310869..36310878,- | ||
}} | }} |
Latest revision as of 22:02, 23 July 2015
Short description: | p@chr11:36310869..36310878, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:36310869..36310878, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.41e-17 | 2 |
placental epithelial cell | 2.03e-12 | 3 |
germ line cell | 1.51e-11 | 7 |
germ cell | 1.51e-11 | 7 |
serous secreting cell | 6.88e-10 | 1 |
intestinal epithelial cell | 3.89e-09 | 4 |
embryonic stem cell | 1.46e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
reproductive organ | 3.64e-10 | 48 |
epithelium of female gonad | 6.88e-10 | 1 |
uterus | 9.35e-10 | 21 |
placenta | 1.55e-09 | 4 |
allantois | 1.55e-09 | 4 |
embryonic uterus | 2.64e-09 | 22 |
internal female genitalia | 2.64e-09 | 22 |
rectum | 3.89e-09 | 4 |
intestinal mucosa | 3.89e-09 | 4 |
wall of intestine | 3.89e-09 | 4 |
gastrointestinal system mucosa | 3.89e-09 | 4 |
gastrointestinal system epithelium | 3.89e-09 | 4 |
intestinal epithelium | 3.89e-09 | 4 |
internal genitalia | 3.63e-08 | 25 |
reproductive structure | 4.49e-08 | 59 |
reproductive system | 4.49e-08 | 59 |
female reproductive organ | 1.18e-07 | 37 |
female reproductive system | 1.18e-07 | 37 |
lower digestive tract | 1.77e-07 | 5 |
female organism | 7.38e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.09e-11 | 25 |
ovary epithelial cancer | 6.88e-10 | 1 |
skin squamous cell carcinoma | 1.48e-09 | 1 |
keratoacanthoma | 1.48e-09 | 1 |
carcinoma | 1.18e-07 | 106 |
cell type cancer | 1.46e-07 | 143 |