FFCP PHASE1:Hg19::chr10:5060184..5060198,-: Difference between revisions
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|id=chr10:5060184..5060198,-
|short_description=p3@AKR1C2
|description=CAGE_peak_3_at_AKR1C2_5end
|association_with_transcript=8bp_to_ENST00000407674,uc001ihs.2,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
| | |EntrezGene=100653286,1646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
| | |||
|HGNC=385 | |HGNC=385 | ||
|TSSclassifier=strong | |||
|UniProt=P52895 | |UniProt=P52895 | ||
|association_with_transcript=8bp_to_ENST00000407674,uc001ihs.2,uc001iht.2_5end | |||
|cluster_id=chr10:5060184..5060198,- | |||
|coexpression_cluster_id=C1585 | |||
|description=CAGE_peak_3_at_AKR1C2_5end | |||
|id=chr10:5060184..5060198,- | |||
|ontology_enrichment_celltype=CL:0000082!6.56e-08!19;CL:0002553!9.91e-08!1;CL:0000319!1.27e-07!1;CL:0000066!8.38e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.61e-13;1!CL:0000319;2.62e-13;1!CL:0000082;2.93e-10;19!CL:0000159;2.74e-07;2!CL:1000415;3.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.61e-13,1;CL:0000319,2.62e-13,1;CL:0000082,2.93e-10,19;CL:0000159,2.74e-07,2;CL:1000415,3.09e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.50e-19;30!UBERON:0008947;3.93e-10;29!UBERON:0009497;8.53e-09;13 | |||
|ontology_enrichment_disease=DOID:0050615!2.45e-13!16;DOID:1324!4.31e-10!15;DOID:305!9.14e-10!106;DOID:3030!1.27e-07!1;DOID:0050619!1.74e-07!1;DOID:1357!1.74e-07!1;DOID:0050687!1.76e-07!143;DOID:5662!2.37e-07!1;DOID:162!7.95e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.97e-18;16!DOID:3030;2.62e-13;1!DOID:0050619;4.77e-13;1!DOID:1357;4.77e-13;1!DOID:1324;6.21e-13;15!DOID:5662;8.64e-13;1!DOID:299;8.69e-08;25!DOID:3493;4.98e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,1.97e-18,16;DOID:3030,2.62e-13,1;DOID:0050619,4.77e-13,1;DOID:1357,4.77e-13,1;DOID:1324,6.21e-13,15;DOID:5662,8.64e-13,1;DOID:305,4.84e-12,106;DOID:0050687,1.54e-08,143;DOID:162,7.06e-08,235;DOID:299,8.38e-08,25;DOID:14566,1.13e-07,239;DOID:3493,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004802!6.56e-08!19;UBERON:0000115!6.56e-08!19;UBERON:0009569!1.36e-07!113;UBERON:0001764!1.74e-07!1;UBERON:0001825!1.74e-07!1;UBERON:0006122!2.23e-07!1;UBERON:0005705!3.41e-07!1;UBERON:0008193!3.41e-07!1;UBERON:0002514!3.41e-07!1;UBERON:0003462!3.41e-07!1;UBERON:0008001!3.41e-07!1;UBERON:0007914!3.41e-07!1;UBERON:0003457!3.41e-07!1;UBERON:0009292!3.41e-07!1;UBERON:0007375!3.41e-07!1;UBERON:0003323!3.41e-07!1;UBERON:0002397!3.41e-07!1;UBERON:0001709!3.41e-07!1;UBERON:0004066!3.41e-07!1;UBERON:0002244!3.41e-07!1;UBERON:0005620!3.41e-07!1;UBERON:0004068!3.41e-07!1;UBERON:0004362!3.41e-07!1;UBERON:0008947!5.72e-07!38;UBERON:0003258!5.72e-07!38;UBERON:0002048!8.61e-07!22;UBERON:0000117!8.61e-07!22;UBERON:0000171!8.61e-07!22;UBERON:0000170!8.61e-07!22;UBERON:0005597!8.61e-07!22;UBERON:0000118!8.61e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;4.77e-13;1!UBERON:0001825;4.77e-13;1!UBERON:0004802;2.93e-10;19!UBERON:0000115;2.93e-10;19!UBERON:0002048;6.90e-09;22!UBERON:0004807;6.90e-09;22!UBERON:0000117;6.90e-09;22!UBERON:0000171;6.90e-09;22!UBERON:0000170;6.90e-09;22!UBERON:0002423;7.94e-08;25!UBERON:0002294;9.24e-08;7!UBERON:0001173;9.24e-08;7!UBERON:0005181;1.35e-07;35!UBERON:0005178;2.86e-07;34!UBERON:0002224;2.86e-07;34!UBERON:0003127;4.17e-07;2!UBERON:0000072;9.65e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,4.77e-13,1;UBERON:0001825,4.77e-13,1;UBERON:0004802,2.93e-10,19;UBERON:0000115,2.93e-10,19;UBERON:0009569,3.13e-09,112;UBERON:0002048,6.90e-09,22;UBERON:0000117,6.90e-09,22;UBERON:0000171,6.90e-09,22;UBERON:0000170,6.90e-09,22;UBERON:0005597,6.90e-09,22;UBERON:0000118,6.90e-09,22;UBERON:0005178,1.26e-08,34;UBERON:0002224,1.26e-08,34;UBERON:0005911,2.16e-08,82;UBERON:0005177,2.19e-08,101;UBERON:0005181,2.23e-08,35;UBERON:0001041,7.78e-08,87;UBERON:0009497,7.94e-08,25;UBERON:0000015,7.94e-08,25;UBERON:0002423,7.94e-08,25;UBERON:0006235,7.94e-08,25;UBERON:0004161,7.94e-08,25;UBERON:0000915,8.65e-08,52;UBERON:0008947,1.05e-07,38;UBERON:0003258,1.05e-07,38;UBERON:0003127,4.17e-07,2;UBERON:0004807,5.10e-07,28 | |||
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|short_description=p3@AKR1C2 | |||
}} | }} |
Latest revision as of 09:57, 18 September 2015
Short description: | p3@AKR1C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AKR1C2_5end |
Coexpression cluster: | C1585_nonsmall_hepatoma_mucinous_bile_lung_Adipocyte_mature |
Association with transcript: | 8bp_to_ENST00000407674, uc001ihs.2, uc001iht.2_5end |
EntrezGene: | 100653286,1646 |
HGNC: | 385 |
UniProt: | P52895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.61e-13 | 1 |
mucus secreting cell | 2.62e-13 | 1 |
epithelial cell of lung | 2.93e-10 | 19 |
seromucus secreting cell | 2.74e-07 | 2 |
epithelial cell of gall bladder | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 4.77e-13 | 1 |
paranasal sinus | 4.77e-13 | 1 |
respiratory tract epithelium | 2.93e-10 | 19 |
lung epithelium | 2.93e-10 | 19 |
subdivision of trunk | 3.13e-09 | 112 |
lung | 6.90e-09 | 22 |
respiratory tube | 6.90e-09 | 22 |
respiration organ | 6.90e-09 | 22 |
pair of lungs | 6.90e-09 | 22 |
lung primordium | 6.90e-09 | 22 |
lung bud | 6.90e-09 | 22 |
thoracic cavity element | 1.26e-08 | 34 |
thoracic cavity | 1.26e-08 | 34 |
endo-epithelium | 2.16e-08 | 82 |
trunk region element | 2.19e-08 | 101 |
thoracic segment organ | 2.23e-08 | 35 |
foregut | 7.78e-08 | 87 |
epithelium of foregut-midgut junction | 7.94e-08 | 25 |
anatomical boundary | 7.94e-08 | 25 |
hepatobiliary system | 7.94e-08 | 25 |
foregut-midgut junction | 7.94e-08 | 25 |
septum transversum | 7.94e-08 | 25 |
thoracic segment of trunk | 8.65e-08 | 52 |
respiratory primordium | 1.05e-07 | 38 |
endoderm of foregut | 1.05e-07 | 38 |
open tracheal system trachea | 4.17e-07 | 2 |
respiratory system epithelium | 5.10e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 1.97e-18 | 16 |
mucinous adenocarcinoma | 2.62e-13 | 1 |
paranasal sinus cancer | 4.77e-13 | 1 |
maxillary sinus cancer | 4.77e-13 | 1 |
lung cancer | 6.21e-13 | 15 |
pleomorphic carcinoma | 8.64e-13 | 1 |
carcinoma | 4.84e-12 | 106 |
cell type cancer | 1.54e-08 | 143 |
cancer | 7.06e-08 | 235 |
adenocarcinoma | 8.38e-08 | 25 |
disease of cellular proliferation | 1.13e-07 | 239 |
signet ring cell adenocarcinoma | 4.42e-07 | 2 |