FFCP PHASE1:Hg19::chr16:85589318..85589348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85589318..85589348,+ | |||
|coexpression_cluster_id=C3595 | |||
|description=CAGE_peak_at_chr16:85589318..85589348,+ | |description=CAGE_peak_at_chr16:85589318..85589348,+ | ||
|id=chr16:85589318..85589348,+ | |id=chr16:85589318..85589348,+ | ||
|ontology_enrichment_celltype=CL:0000763!4.35e-24!112;CL:0000049!4.35e-24!112;CL:0000037!8.97e-23!172;CL:0000566!8.97e-23!172;CL:0000988!2.72e-22!182;CL:0002032!9.12e-22!165;CL:0000837!9.12e-22!165;CL:0000766!2.78e-17!76;CL:0002057!1.76e-16!42;CL:0000860!3.05e-16!45;CL:0000738!2.60e-14!140;CL:0000839!2.48e-13!70;CL:0000557!4.44e-13!71;CL:0002031!2.90e-11!124;CL:0002194!1.17e-10!63;CL:0000576!1.17e-10!63;CL:0000040!1.17e-10!63;CL:0000559!1.17e-10!63;CL:0002087!2.37e-10!119;CL:0002009!3.34e-10!65 | |ontology_enrichment_celltype=CL:0000763!4.35e-24!112;CL:0000049!4.35e-24!112;CL:0000037!8.97e-23!172;CL:0000566!8.97e-23!172;CL:0000988!2.72e-22!182;CL:0002032!9.12e-22!165;CL:0000837!9.12e-22!165;CL:0000766!2.78e-17!76;CL:0002057!1.76e-16!42;CL:0000860!3.05e-16!45;CL:0000738!2.60e-14!140;CL:0000839!2.48e-13!70;CL:0000557!4.44e-13!71;CL:0002031!2.90e-11!124;CL:0002194!1.17e-10!63;CL:0000576!1.17e-10!63;CL:0000040!1.17e-10!63;CL:0000559!1.17e-10!63;CL:0002087!2.37e-10!119;CL:0002009!3.34e-10!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.51e-17;33!CL:0002057;4.51e-17;33!CL:0000576;3.39e-12;48!CL:0000766;3.56e-11;69!CL:0000763;8.04e-11;100!CL:0000473;9.39e-11;39!CL:0000234;9.39e-11;39!CL:0000094;9.84e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.64e-30,108;CL:0000049,3.64e-30,108;CL:0000988,5.37e-24,177;CL:0000037,5.63e-24,168;CL:0002032,7.07e-23,161;CL:0000837,7.07e-23,161;CL:0000766,9.58e-23,72;CL:0000860,1.36e-20,42;CL:0002057,1.36e-20,42;CL:0000557,2.09e-17,67;CL:0000839,5.45e-17,66;CL:0000473,5.67e-16,48;CL:0000234,5.67e-16,48;CL:0000738,6.88e-15,136;CL:0002194,7.04e-14,59;CL:0000576,7.04e-14,59;CL:0000040,7.04e-14,59;CL:0000559,7.04e-14,59;CL:0002009,1.60e-13,61;CL:0002031,5.10e-11,120;CL:0002087,5.09e-10,115;CL:0000094,1.04e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-15;42!CL:0000049;6.61e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!2.63e-10!31;DOID:1240!1.03e-09!39;DOID:2531!4.59e-07!51;DOID:0060083!4.59e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.45e-11;31!DOID:1240;4.58e-08;39!DOID:1036;4.16e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.41e-11,31;DOID:1240,4.64e-10,39;DOID:1036,5.95e-07,8;DOID:2531,9.49e-07,51;DOID:0060083,9.49e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.09e-17!102;UBERON:0003061!1.09e-17!102;UBERON:0002193!4.74e-13!112;UBERON:0002371!2.93e-11!80;UBERON:0001474!7.71e-11!86;UBERON:0000178!2.62e-08!15;UBERON:0000179!2.62e-08!15;UBERON:0000463!2.62e-08!15;UBERON:0002405!3.03e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-10;15!UBERON:0000179;2.90e-10;15!UBERON:0000463;2.90e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.89e-21,98;UBERON:0003061,1.89e-21,98;UBERON:0002193,5.08e-17,108;UBERON:0002371,2.54e-14,76;UBERON:0001474,7.69e-14,82;UBERON:0004765,1.90e-11,90;UBERON:0002405,2.06e-10,93;UBERON:0000178,2.43e-10,15;UBERON:0000179,2.43e-10,15;UBERON:0000463,2.43e-10,15;UBERON:0001434,3.78e-09,100 | |||
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| ||
|short_description=p@chr16:85589318..85589348,+ | |short_description=p@chr16:85589318..85589348,+ | ||
}} | }} |
Latest revision as of 12:59, 25 July 2015
Short description: | p@chr16:85589318..85589348, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85589318..85589348, + |
Coexpression cluster: | C3595_acute_Mast_parietal_chronic_placenta_choriocarcinoma_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.64e-30 | 108 |
common myeloid progenitor | 3.64e-30 | 108 |
hematopoietic cell | 5.37e-24 | 177 |
hematopoietic stem cell | 5.63e-24 | 168 |
hematopoietic oligopotent progenitor cell | 7.07e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.07e-23 | 161 |
myeloid leukocyte | 9.58e-23 | 72 |
classical monocyte | 1.36e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.36e-20 | 42 |
granulocyte monocyte progenitor cell | 2.09e-17 | 67 |
myeloid lineage restricted progenitor cell | 5.45e-17 | 66 |
defensive cell | 5.67e-16 | 48 |
phagocyte | 5.67e-16 | 48 |
leukocyte | 6.88e-15 | 136 |
monopoietic cell | 7.04e-14 | 59 |
monocyte | 7.04e-14 | 59 |
monoblast | 7.04e-14 | 59 |
promonocyte | 7.04e-14 | 59 |
macrophage dendritic cell progenitor | 1.60e-13 | 61 |
hematopoietic lineage restricted progenitor cell | 5.10e-11 | 120 |
nongranular leukocyte | 5.09e-10 | 115 |
granulocyte | 1.04e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.89e-21 | 98 |
blood island | 1.89e-21 | 98 |
hemolymphoid system | 5.08e-17 | 108 |
bone marrow | 2.54e-14 | 76 |
bone element | 7.69e-14 | 82 |
skeletal element | 1.90e-11 | 90 |
immune system | 2.06e-10 | 93 |
blood | 2.43e-10 | 15 |
haemolymphatic fluid | 2.43e-10 | 15 |
organism substance | 2.43e-10 | 15 |
skeletal system | 3.78e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.41e-11 | 31 |
leukemia | 4.64e-10 | 39 |
chronic leukemia | 5.95e-07 | 8 |
hematologic cancer | 9.49e-07 | 51 |
immune system cancer | 9.49e-07 | 51 |