FFCP PHASE1:Hg19::chr10:52645416..52645444,-: Difference between revisions
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|id=chr10:52645416..52645444,-
|short_description=p2@A1CF
|description=CAGE_peak_2_at_A1CF_5end
|association_with_transcript=0bp_to_ENST00000282641,ENST00000373995,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29974 | |EntrezGene=29974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24086 | |HGNC=24086 | ||
|UniProt=Q9NQ94, | |TSSclassifier=strong | ||
|UniProt=Q9NQ94,Q5T0W7,B4E1E3,Q7Z2U9 | |||
|association_with_transcript=0bp_to_ENST00000282641,ENST00000373995,ENST00000373997,ENST00000374001,ENST00000395495,ENST00000414883,ENST00000473480,NM_001198818,NM_001198819,NM_001198820,NM_014576,NM_138932,NM_138933,uc001jjh.2,uc001jji.2,uc001jjj.2,uc001jjk.1,uc009xov.2,uc010qho.1_5end | |||
|cluster_id=chr10:52645416..52645444,- | |||
|coexpression_cluster_id=C783 | |||
|description=CAGE_peak_2_at_A1CF_5end | |||
|id=chr10:52645416..52645444,- | |||
|ontology_enrichment_celltype=CL:0000181!7.17e-23!12;CL:0000417!7.17e-23!12;CL:0000668!7.17e-23!12;CL:0000414!7.17e-23!12;CL:0000412!7.17e-23!12;CL:0000182!7.17e-23!12;CL:0000223!2.96e-08!59;CL:0002322!9.17e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.21e-32;12!CL:0002563;3.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.12e-32,12;CL:0000223,5.43e-11,58;CL:0002563,3.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.32e-35;11!UBERON:0009497;2.79e-29;13!UBERON:0003104;1.27e-25;31!UBERON:0001041;4.71e-12;30!CL:0000223;2.96e-07;58!UBERON:0006242;3.73e-07;1!UBERON:0001045;4.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.39e-22!19;UBERON:0006925!7.39e-22!19;UBERON:0008836!7.39e-22!19;UBERON:0009854!2.52e-21!23;UBERON:0009497!1.92e-19!25;UBERON:0000015!1.92e-19!25;UBERON:0002423!1.92e-19!25;UBERON:0006235!1.92e-19!25;UBERON:0004161!1.92e-19!25;UBERON:0008835!1.35e-18!22;UBERON:0003894!1.35e-18!22;UBERON:0009856!1.37e-18!26;UBERON:0005057!1.63e-18!26;UBERON:0004921!1.16e-17!129;UBERON:0004185!1.16e-17!129;UBERON:0005409!6.29e-17!35;UBERON:0005172!1.78e-16!55;UBERON:0005173!1.78e-16!55;UBERON:0000160!3.34e-16!27;UBERON:0007499!4.07e-16!25;UBERON:0001007!6.13e-15!155;UBERON:0001555!6.13e-15!155;UBERON:0007026!6.13e-15!155;UBERON:0002417!1.73e-14!61;UBERON:0000916!1.73e-14!61;UBERON:0000059!2.76e-13!11;UBERON:0004119!3.60e-13!169;UBERON:0000925!3.60e-13!169;UBERON:0006595!3.60e-13!169;UBERON:0003929!5.23e-13!54;UBERON:0002365!1.33e-12!31;UBERON:0002330!1.33e-12!31;UBERON:0001155!1.30e-11!9;UBERON:0005177!3.04e-11!107;UBERON:0002368!6.24e-11!35;UBERON:0005911!4.77e-10!82;UBERON:0000949!9.02e-10!45;UBERON:0000077!1.43e-09!130;UBERON:0009569!3.25e-09!113;UBERON:0004907!3.37e-08!5;UBERON:0001041!1.31e-07!98;UBERON:0002530!5.83e-07!59;UBERON:0000466!7.50e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.37e-31;19!UBERON:0006925;2.37e-31;19!UBERON:0000160;2.60e-31;17!UBERON:0002423;3.59e-28;25!UBERON:0005409;3.87e-24;22!UBERON:0000059;9.40e-19;11!UBERON:0002365;4.19e-18;31!UBERON:0002330;4.19e-18;31!UBERON:0001155;2.87e-16;9!UBERON:0002368;9.98e-16;33!UBERON:0004921;3.65e-14;33!UBERON:0001007;1.41e-12;81!UBERON:0000949;1.62e-11;43!UBERON:0002108;1.73e-11;4!UBERON:0004907;3.18e-11;5!UBERON:0005172;4.54e-11;52!UBERON:0005173;4.54e-11;52!UBERON:0002417;2.55e-08;58!UBERON:0000916;2.55e-08;58!UBERON:0001242;3.63e-07;4!UBERON:0001262;3.63e-07;4!UBERON:0004786;3.63e-07;4!UBERON:0004808;3.63e-07;4!UBERON:0001277;3.63e-07;4!UBERON:0001154;4.34e-07;1!UBERON:0001153;4.34e-07;1!UBERON:0009854;4.34e-07;1!UBERON:0001052;6.65e-07;4!UBERON:0002530;7.85e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.33e-31,19;UBERON:0006925,2.33e-31,19;UBERON:0008836,2.33e-31,19;UBERON:0000160,2.82e-31,17;UBERON:0009854,8.71e-31,23;UBERON:0009497,3.50e-28,25;UBERON:0000015,3.50e-28,25;UBERON:0002423,3.50e-28,25;UBERON:0006235,3.50e-28,25;UBERON:0004161,3.50e-28,25;UBERON:0009856,5.36e-27,26;UBERON:0008835,7.68e-27,22;UBERON:0003894,7.68e-27,22;UBERON:0007499,2.09e-23,25;UBERON:0005409,3.93e-21,25;UBERON:0004921,2.63e-20,118;UBERON:0003929,9.43e-20,54;UBERON:0000059,9.87e-19,11;UBERON:0002365,1.57e-18,31;UBERON:0002330,1.57e-18,31;UBERON:0001007,2.15e-17,145;UBERON:0001555,2.15e-17,145;UBERON:0007026,2.15e-17,145;UBERON:0005172,8.67e-17,54;UBERON:0005173,8.67e-17,54;UBERON:0001155,2.92e-16,9;UBERON:0002368,3.31e-16,35;UBERON:0004119,2.46e-15,160;UBERON:0000925,2.46e-15,160;UBERON:0006595,2.46e-15,160;UBERON:0002417,7.51e-15,60;UBERON:0000916,7.51e-15,60;UBERON:0000949,9.61e-15,45;UBERON:0005911,6.30e-14,82;UBERON:0002108,1.79e-11,4;UBERON:0004907,3.18e-11,5;UBERON:0002530,8.31e-11,59;UBERON:0005177,1.29e-10,101;UBERON:0011216,1.55e-09,223;UBERON:0009569,5.63e-08,112;UBERON:0003104,1.46e-07,160;UBERON:0009142,1.46e-07,160;UBERON:0001242,3.63e-07,4;UBERON:0001262,3.63e-07,4;UBERON:0004786,3.63e-07,4;UBERON:0004808,3.63e-07,4;UBERON:0001277,3.63e-07,4;UBERON:0001154,4.09e-07,1;UBERON:0001153,4.09e-07,1;UBERON:0001045,4.09e-07,1;UBERON:0001052,6.85e-07,4 | |||
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| ||
|short_description=p2@A1CF | |||
}} | }} |
Latest revision as of 11:23, 18 September 2015
Short description: | p2@A1CF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_A1CF_5end |
Coexpression cluster: | C783_argyrophil_Hepatocyte_liver_gastrointestinal_hepatocellular_adenocarcinoma_Intestinal |
Association with transcript: | 0bp_to_ENST00000282641, ENST00000373995, ENST00000373997, ENST00000374001, ENST00000395495, ENST00000414883, ENST00000473480, NM_001198818, NM_001198819, NM_001198820, NM_014576, NM_138932, NM_138933, uc001jjh.2, uc001jji.2, uc001jjj.2, uc001jjk.1, uc009xov.2, uc010qho.1_5end |
EntrezGene: | A1CF |
HGNC: | 24086 |
UniProt: | Q9NQ94Q5T0W7B4E1E3Q7Z2U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.12e-32 | 12 |
endodermal cell | 5.43e-11 | 58 |
intestinal epithelial cell | 3.63e-07 | 4 |