FFCP PHASE1:Hg19::chr10:5638048..5638094,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:5638048..5638094,-
|short_description=p1@ENST00000478294
|description=CAGE_peak_1_at_ENST00000478294_5end
|association_with_transcript=0bp_to_ENST00000478...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478294_5end | |||
|cluster_id=chr10:5638048..5638094,- | |||
|description=CAGE_peak_1_at_ENST00000478294_5end | |||
|id=chr10:5638048..5638094,- | |||
|ontology_enrichment_celltype=CL:0000548!5.69e-15!679;CL:0000004!5.69e-15!679;CL:0000255!5.69e-15!679;CL:0000220!7.01e-15!246;CL:0000012!1.41e-14!682;CL:0002321!1.73e-14!248;CL:0000066!1.90e-14!254;CL:0002076!4.23e-12!43;CL:0000055!3.10e-11!180;CL:0000144!2.81e-10!625;CL:0000003!1.05e-09!722;CL:0000057!2.98e-09!75;CL:0002368!4.45e-09!13;CL:0002371!1.23e-08!591;CL:0000223!4.04e-07!59;CL:0000680!4.86e-07!57;CL:0000056!4.86e-07!57;CL:0000355!4.86e-07!57;CL:0000063!8.37e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.41e-12;42!CL:0002368;1.33e-11;13!CL:0000244;7.22e-09;4!CL:0000731;7.22e-09;4!CL:0002159;8.97e-09;14!CL:0002202;4.70e-08;9!CL:0002632;4.70e-08;9!CL:0002621;7.06e-08;3!CL:0002166;8.67e-08;3!CL:0000307;3.58e-07;3!CL:0002251;7.32e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.92e-16,42;CL:0000066,5.46e-14,253;CL:0002368,1.36e-11,13;CL:0000223,2.92e-10,58;CL:0000244,6.50e-09,4;CL:0000731,6.50e-09,4;CL:0002321,7.25e-09,250;CL:0002159,8.93e-09,14;CL:0002202,4.52e-08,9;CL:0002632,4.52e-08,9;CL:0002621,7.10e-08,3;CL:0002166,8.62e-08,3;CL:0000068,3.99e-07,3;CL:0000069,3.99e-07,3;CL:0000307,3.99e-07,3;CL:0000377,3.99e-07,3;CL:0002251,7.44e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000377;3.58e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;4.28e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.30e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.10e-14!95;UBERON:0000486!6.88e-12!82;UBERON:0000914!6.02e-11!83;UBERON:0002329!6.02e-11!83;UBERON:0003077!6.02e-11!83;UBERON:0003059!6.02e-11!83;UBERON:0007282!6.02e-11!83;UBERON:0009618!6.02e-11!83;UBERON:0007285!6.02e-11!83;UBERON:0000475!1.19e-09!365;UBERON:0004290!1.12e-08!70;UBERON:0002100!3.29e-08!216;UBERON:0002199!1.16e-07!45;UBERON:0002416!1.16e-07!45;UBERON:0002097!1.24e-07!40;UBERON:0005256!2.48e-07!143;UBERON:0001444!3.80e-07!48;UBERON:0000165!6.48e-07!28;UBERON:0000930!6.48e-07!28;UBERON:0003104!8.47e-07!238;UBERON:0009142!8.47e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;6.83e-12;13!UBERON:0000365;1.27e-10;5!UBERON:0000486;1.34e-10;12!UBERON:0005910;9.24e-09;6!UBERON:0000344;1.05e-08;20!UBERON:0000165;6.42e-08;28!UBERON:0001949;7.06e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.62e-15,99;UBERON:0003729,8.35e-12,13;UBERON:0000365,1.32e-10,5;UBERON:0000033,4.14e-09,56;UBERON:0005910,9.53e-09,6;UBERON:0000344,1.28e-08,20;UBERON:0001949,7.10e-08,3;UBERON:0000153,9.68e-08,62;UBERON:0007811,9.68e-08,62;UBERON:0000165,1.89e-07,29;UBERON:0000930,1.89e-07,29;UBERON:0000486,5.28e-07,83 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,1.31064823278103,3.16520373874144,0.495065411840187,0,1.34465029290355,0.602694528023977,2.19093027116212,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,4.59710612239464,3.614471025339,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0,4.00724817121796,2.96627554227544,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0.44905874525234,0,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0.132409180813219,0,0,0,2.1349799145941,0.49333509683432,0,0,0,0.151357427644931,0,0.234321431833797,1.87296046098192,2.2818872861778,0.149448680551801,0.469737994575059,0.485618833104395,0.702254033511242,1.02077085627447,3.93069815397658,0.206651562351531,0,0.494533858557114,0,0,3.36672227908132,1.12606667884768,1.38532057742091,0.438977620880838,0,0,0.567160915800105,0.358779271377724,0.213557388818567,0.423863802319124,0,0.721367704669072,0,0,0.675105328965065,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0.906768884048762,1.69560592310488,11.4023903366345,8.45512973831587,12.3325976017272,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,6.03626569747441,0,4.12168786887686,3.42577247086559,0,1.03993478527958,0,0,0.234817388471643,0.144366447761074,0,0.570762456703795,0,0,0,0,0,11.2480600784132,8.56708853814184,7.51408015384648,1.88072897675981,7.26584846284905,4.60059214998253,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.448524337381443,0,1.7601188597028,0.646358578788889,0,1.690605505112,0.26593811658487,0,0.514414748524284,0,1.0656887160644,0,0,0,0.325736184293735,0,0,1.50719688529793,2.61460037580088,0.299918973546171,0,0,0,0,0,0,0.579125226670317,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,0.356857977594324,0,0.702848489956279,0,0,0,0.664225598535437,0.921845842708516,0.955719759148911,0,0,0,0,0,1.21251028578504,0,0.907170879989041,0,0.306923946576125,0.280660094433074,0.256278298511402,0,0.160853921143607,0,3.39261326365842,3.72879623157567,3.77784917663522,0.519254429183621,1.97557643381931,0,5.21316822788541,0.368323955743585,0,0,0,0,0.539107359730903,0,0,0.844413031143006,1.13733384070897,0,0.215915916102139,0,1.35473218771926,1.00337954770971,0.254876273045038,0,1.11937377361089,0,0,0,0.656029291399411,0,0,0,0.082509499920588,2.29706215198469,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.827019434907183,1.50388342815583,0.290033387828457,0.426133137080504,0,4.46269271474641,1.34533047155574,5.10450849978336,0.30347334256665,0.464845549297286,0,1.3940745403212,0.616067160352178,0.532306030317022,0.869932992075073,1.11194531462352,0,0,0,0,0,0,3.5002357271853,0,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0,1.13008116620243,2.2054613741845,1.99031692572366,0,0.578775534266688,0,0.202910376962704,1.239293992399,0.845086807596724,0,0,0,2.12856638442359,0,0,1.51789269506286,0,5.48466042535419,6.03272047982209,2.17781969722645,0,4.73555909938353,3.36942951335251,2.66058092122005,6.43225520579487,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,3.69376990848337,1.67121139316383,0,0.307160702099232,0,0,3.33926115068718,0,0,0,0,0,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.269272933229316,0,0.638002319463839,0.366390373607449,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0,0,0.103688191397247,1.99396161812156,3.64091151463049,4.39506085770115,0,0,0,0.347119476670262,1.07791637155815,2.61177619741208,0,0,0,0,0,0,0,0.225980740780532,4.52238351334278,4.57043606916876,0,0,0.64127056201227,0,1.59847687665704,0,0,0,0,2.23654564017779,0,0.951329442515298,0.732219924186332,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72760594037872,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,1.72844298240254,0.326587360109409,0,0,8.86017713284193,0.79318464064088,0,0,0,0,0.171086837884329,4.9337051562167,0,0,0,0,0,0,5.10673006216145,0,0,0,0,0,0,0,0,0,0,0,0,2.12466693535581,0,0,2.82318983637806,0,0,1.19403842309499,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0.63718706865481,0,0.465788870628778,0.414706207840855,0.797525143673985,0,0.450772826991655,0.380805212168795,0,0.363697318405119,0.322231671127465,0.928067519756987,0.398095888698616,0.400027764663154,0,0.673498977531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| ||
|short_description=p1@ENST00000478294 | |||
}} | }} |
Latest revision as of 14:13, 23 July 2015
Short description: | p1@ENST00000478294 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000478294_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000478294_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.92e-16 | 42 |
epithelial cell | 5.46e-14 | 253 |
respiratory epithelial cell | 1.36e-11 | 13 |
endodermal cell | 2.92e-10 | 58 |
transitional epithelial cell | 6.50e-09 | 4 |
urothelial cell | 6.50e-09 | 4 |
embryonic cell | 7.25e-09 | 250 |
general ecto-epithelial cell | 8.93e-09 | 14 |
epithelial cell of tracheobronchial tree | 4.52e-08 | 9 |
epithelial cell of lower respiratory tract | 4.52e-08 | 9 |
gingival epithelial cell | 7.10e-08 | 3 |
epithelial cell of Malassez | 8.62e-08 | 3 |
duct epithelial cell | 3.99e-07 | 3 |
branched duct epithelial cell | 3.99e-07 | 3 |
tracheal epithelial cell | 3.99e-07 | 3 |
tracheoblast | 3.99e-07 | 3 |
epithelial cell of alimentary canal | 7.44e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.62e-15 | 99 |
mouth mucosa | 8.35e-12 | 13 |
urothelium | 1.32e-10 | 5 |
head | 4.14e-09 | 56 |
transitional epithelium | 9.53e-09 | 6 |
mucosa | 1.28e-08 | 20 |
gingival epithelium | 7.10e-08 | 3 |
anterior region of body | 9.68e-08 | 62 |
craniocervical region | 9.68e-08 | 62 |
mouth | 1.89e-07 | 29 |
stomodeum | 1.89e-07 | 29 |
multilaminar epithelium | 5.28e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.30e-08 | 14 |