FFCP PHASE1:Hg19::chr12:109747083..109747094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121643 | |EntrezGene=121643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21399 | |HGNC=21399 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NZ1,A6H901 | |UniProt=Q96NZ1,A6H901 | ||
|association_with_transcript=-58bp_to_ENST00000266856,ENST00000299162,ENST00000355216,NM_213596,uc001toe.3,uc001tof.3_5end | |association_with_transcript=-58bp_to_ENST00000266856,ENST00000299162,ENST00000355216,NM_213596,uc001toe.3,uc001tof.3_5end | ||
|cluster_id=chr12:109747083..109747094,- | |||
|coexpression_cluster_id=C3235 | |||
|description=CAGE_peak_2_at_FOXN4_5end | |description=CAGE_peak_2_at_FOXN4_5end | ||
|id=chr12:109747083..109747094,- | |id=chr12:109747083..109747094,- | ||
|ontology_enrichment_celltype=CL:0000242!1.68e-10!2;CL:0000312!1.35e-08!5;CL:0000080!1.84e-07!6;CL:0000240!3.15e-07!6;CL:0000311!3.15e-07!6;CL:0000079!3.15e-07!6;CL:0000237!3.15e-07!6;CL:0000036!3.15e-07!6;CL:0000357!3.15e-07!6;CL:0000114!3.15e-07!6;CL:0002319!3.23e-07!25;CL:0000540!5.44e-07!6;CL:0000031!5.44e-07!6;CL:0000404!5.44e-07!6 | |ontology_enrichment_celltype=CL:0000242!1.68e-10!2;CL:0000312!1.35e-08!5;CL:0000080!1.84e-07!6;CL:0000240!3.15e-07!6;CL:0000311!3.15e-07!6;CL:0000079!3.15e-07!6;CL:0000237!3.15e-07!6;CL:0000036!3.15e-07!6;CL:0000357!3.15e-07!6;CL:0000114!3.15e-07!6;CL:0002319!3.23e-07!25;CL:0000540!5.44e-07!6;CL:0000031!5.44e-07!6;CL:0000404!5.44e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.68e-28;2!CL:0000242;8.68e-28;2!CL:0000312;1.00e-11;5!CL:0000240;6.35e-10;6!CL:0000311;6.35e-10;6!CL:0000079;6.35e-10;6!CL:0000237;6.35e-10;6!CL:0002253;6.35e-08;2!CL:0002535;6.35e-08;2!CL:0000095;6.63e-07;17!CL:0000362;6.69e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.73e-28,2;CL:0000312,7.88e-12,5;CL:0000240,5.20e-10,6;CL:0000311,5.20e-10,6;CL:0000079,5.20e-10,6;CL:0000237,5.20e-10,6;CL:0000036,5.20e-10,6;CL:0000357,5.20e-10,6;CL:0000114,5.20e-10,6;CL:0002253,4.38e-08,2;CL:0002535,5.37e-08,2;CL:0000362,5.86e-07,9;CL:0000095,5.87e-07,17;CL:0000123,5.87e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000357;6.35e-10;6!CL:0000114;6.35e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;6.35e-08;2!DOID:4236;6.35e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,6.15e-08,2;DOID:4236,6.15e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.71e-12;10!UBERON:0000178;1.62e-08;15!UBERON:0000179;1.62e-08;15!UBERON:0000463;1.62e-08;15!UBERON:0006955;6.35e-08;2!UBERON:0004801;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.68e-12,10;UBERON:0000358,1.68e-12,10;UBERON:0000307,1.68e-12,10;UBERON:0000091,1.68e-12,10;UBERON:0000087,1.68e-12,10;UBERON:0007010,1.68e-12,10;UBERON:0007806,1.68e-12,10;UBERON:0008780,1.68e-12,10;UBERON:0005728,1.68e-12,10;UBERON:0000178,1.60e-08,15;UBERON:0000179,1.60e-08,15;UBERON:0000463,1.60e-08,15;UBERON:0006955,5.37e-08,2;UBERON:0004801,5.37e-08,2 | |||
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| ||
|short_description=p2@FOXN4 | |short_description=p2@FOXN4 | ||
}} | }} |
Latest revision as of 06:37, 16 September 2015
Short description: | p2@FOXN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXN4_5end |
Coexpression cluster: | C3235_gastrointestinal_neuroblastoma_merkel_carcinosarcoma_non_carcinoid_colon |
Association with transcript: | -58bp_to_ENST00000266856, ENST00000299162, ENST00000355216, NM_213596, uc001toe.3, uc001tof.3_5end |
EntrezGene: | FOXN4 |
HGNC: | 21399 |
UniProt: | Q96NZ1A6H901 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.73e-28 | 2 |
keratinocyte | 7.88e-12 | 5 |
stratified squamous epithelial cell | 5.20e-10 | 6 |
keratin accumulating cell | 5.20e-10 | 6 |
stratified epithelial cell | 5.20e-10 | 6 |
keratinizing barrier epithelial cell | 5.20e-10 | 6 |
epithelial fate stem cell | 5.20e-10 | 6 |
stratified epithelial stem cell | 5.20e-10 | 6 |
surface ectodermal cell | 5.20e-10 | 6 |
epithelial cell of large intestine | 4.38e-08 | 2 |
epithelial cell of cervix | 5.37e-08 | 2 |
epidermal cell | 5.86e-07 | 9 |
neuron associated cell | 5.87e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.87e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.68e-12 | 10 |
blastocyst | 1.68e-12 | 10 |
blastula | 1.68e-12 | 10 |
bilaminar disc | 1.68e-12 | 10 |
inner cell mass | 1.68e-12 | 10 |
cleaving embryo | 1.68e-12 | 10 |
connecting stalk | 1.68e-12 | 10 |
inner cell mass derived epiblast | 1.68e-12 | 10 |
extraembryonic mesoderm | 1.68e-12 | 10 |
blood | 1.60e-08 | 15 |
haemolymphatic fluid | 1.60e-08 | 15 |
organism substance | 1.60e-08 | 15 |
uterine epithelium | 5.37e-08 | 2 |
cervix epithelium | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 6.15e-08 | 2 |
carcinosarcoma | 6.15e-08 | 2 |