FFCP PHASE1:Hg19::chr12:125398602..125398622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7316 | |EntrezGene=7316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12468 | |HGNC=12468 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXK7 | |UniProt=F5GXK7 | ||
|association_with_transcript=0bp_to_ENST00000541272,ENST00000544481_5end | |association_with_transcript=0bp_to_ENST00000541272,ENST00000544481_5end | ||
|cluster_id=chr12:125398602..125398622,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_UBC_5end | |description=CAGE_peak_6_at_UBC_5end | ||
|id=chr12:125398602..125398622,- | |id=chr12:125398602..125398622,- | ||
|ontology_enrichment_celltype=CL:0002076!5.65e-11!43;CL:0000066!4.73e-10!254;CL:0000223!9.28e-08!59;CL:0002368!3.28e-07!13 | |ontology_enrichment_celltype=CL:0002076!5.65e-11!43;CL:0000066!4.73e-10!254;CL:0000223!9.28e-08!59;CL:0002368!3.28e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.15e-14;5!CL:0000307;3.20e-14;3!CL:0002621;9.92e-14;3!CL:0002202;4.26e-12;9!CL:0002632;4.26e-12;9!CL:0002368;1.31e-11;13!CL:0002076;4.36e-08;42!CL:0000990;4.94e-08;8!CL:0002159;1.09e-07;14!CL:0002166;5.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.48e-14,5;CL:0000068,4.70e-14,3;CL:0000069,4.70e-14,3;CL:0000307,4.70e-14,3;CL:0000377,4.70e-14,3;CL:0002621,1.14e-13,3;CL:0002202,4.13e-12,9;CL:0002632,4.13e-12,9;CL:0002368,1.42e-11,13;CL:0002076,1.66e-10,42;CL:0000990,5.34e-08,8;CL:0002159,8.73e-08,14;CL:0000223,5.02e-07,58;CL:0002166,6.56e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;3.20e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.09e-09!72;UBERON:0000065!6.57e-08!53;UBERON:0000062!2.96e-07!511;UBERON:0005157!5.29e-07!51;UBERON:0000064!9.94e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.92e-14;3!UBERON:0007196;3.83e-07;15!UBERON:0001558;3.83e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.14e-13,3;UBERON:0007196,3.76e-07,15;UBERON:0001558,3.76e-07,15 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,1.50602959389125,1.47901604066715,0.0774672005803016,0,0,0.553995408531877,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0.962787081228281,0,0,0,0.426224750532694,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,33.0722165631724,1.82147644146271,0.370784442784429,0.324547393654683,0.348259474598534,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.264818361626438,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,2.51239109112286,1.36373060295417,1.14721838155602,0,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0,0.337169380156203,0.241011029883482,0.661763836394364,0.435758888184812,0.474541238222193,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,2.08525542276389,0,0.100528972411631,0.833296006426766,0,0,0,0,0.469634776943287,0.144366447761074,0,0,0,0.858486162094873,0,0.234004265139238,0.148631162288728,4.68669169933885,1.17587489739202,0.708875486211932,2.7763142037883,0.871901815541886,2.30029607499127,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,1.01346914667305,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0,0,1.66435439510497,0,0,0,0,0,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,2.6065841139427,0.368323955743585,0.114814448164607,0.182091168006717,0,0.451199612907412,0.539107359730903,0,0,0.73886140225013,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0.219259876645935,0,0,0.328014645699706,0,0.721287081534056,0,0,1.72279661398852,0,0,0,0,0,0,0.214840489736547,0,0,0,0.991709492165869,1.15314040419064,0.382838137483752,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,1.15466535270614,3.35151137767894,2.17781969722645,0.847294206991012,0,0,0,3.44585100310439,0,0,0,0.238231775457789,0,0,0,0,0.427296284509893,0.962479855263359,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0.242721043499027,0.334330152832435,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0.281338832821026,0,0,0,0,0,0,0,0.246169610922139,0.622079175323615,0.0898683511473268,0.179021174675609,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0.361789315876224,0,0.110579259931225,0,0.87754158861589,0,0.557694977114413,0.307801034015188,0.113942055847001,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0.489698424477443,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0.971121518136371,0,0,0,0.252746318513952,0.450970258243478,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.261177619741208,0.698906672968121,3.43972064943233,0,0,0,1.26085721434945,2.55942767405351,0,0.137041924646751,0,0.379864775735272,0,0.961905843018405,0,0.19980960958213,0.144090417154106,0.572682980829578,0,0.14405479798815,2.23654564017779,0.235694034616795,0,0,0.101998217636322,0.288950589901519,0,0,0,0,1.57732412567589,0.279282401272254,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0.335917362433631,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0.303747783290123,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,1.53532157855556,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0.340776043570843,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0.513260513652988,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0.628216385000937,0.886068179966986,0.122026264901963,0.250381861413,0,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0.47789030149110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| ||
|short_description=p6@UBC | |short_description=p6@UBC | ||
}} | }} |
Latest revision as of 04:46, 17 September 2015
Short description: | p6@UBC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UBC_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000541272, ENST00000544481_5end |
EntrezGene: | UBC |
HGNC: | 12468 |
UniProt: | F5GXK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.48e-14 | 5 |
duct epithelial cell | 4.70e-14 | 3 |
branched duct epithelial cell | 4.70e-14 | 3 |
tracheal epithelial cell | 4.70e-14 | 3 |
tracheoblast | 4.70e-14 | 3 |
gingival epithelial cell | 1.14e-13 | 3 |
epithelial cell of tracheobronchial tree | 4.13e-12 | 9 |
epithelial cell of lower respiratory tract | 4.13e-12 | 9 |
respiratory epithelial cell | 1.42e-11 | 13 |
endo-epithelial cell | 1.66e-10 | 42 |
conventional dendritic cell | 5.34e-08 | 8 |
general ecto-epithelial cell | 8.73e-08 | 14 |
endodermal cell | 5.02e-07 | 58 |
epithelial cell of Malassez | 6.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.14e-13 | 3 |
tracheobronchial tree | 3.76e-07 | 15 |
lower respiratory tract | 3.76e-07 | 15 |