FFCP PHASE1:Mm9::chrX:20506928..20506955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1257 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:20506928..20506955,- | |||
|description=CAGE_peak_at_chrX:20506928..20506955,- | |description=CAGE_peak_at_chrX:20506928..20506955,- | ||
|id=chrX:20506928..20506955,- | |id=chrX:20506928..20506955,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.73e-14,13;CL:0002092,1.64e-13,3;CL:0002540,1.64e-13,3;CL:0000763,2.90e-11,16;CL:0000553,1.43e-10,6;CL:0000556,1.43e-10,6;CL:0002194,1.45e-09,4;CL:0000766,1.45e-09,4;CL:0000234,1.45e-09,4;CL:0000576,1.45e-09,4;CL:0000235,1.45e-09,4;CL:0000864,1.45e-09,4;CL:0002009,1.45e-09,4;CL:0000040,1.45e-09,4;CL:0000559,1.45e-09,4;CL:0000049,2.35e-09,19;CL:0002476,2.90e-09,2;CL:0002320,3.87e-07,46;CL:0000134,3.87e-07,46;CL:0000050,4.41e-07,9;CL:0002031,6.56e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.00e-18!70;UBERON:0002193!1.97e-12!48;UBERON:0002390!3.90e-11!45;UBERON:0003061!3.90e-11!45;UBERON:0001474!2.79e-09!22;UBERON:0004765!2.79e-09!22;UBERON:0001434!2.79e-09!22;UBERON:0005057!3.88e-09!51;UBERON:0002371!6.76e-09!16;UBERON:0000926!7.77e-07!193;UBERON:0004120!7.77e-07!193;UBERON:0006603!7.77e-07!193;UBERON:0002365!8.27e-07!25;UBERON:0002330!8.27e-07!25 | |ontology_enrichment_uberon=UBERON:0002405!7.00e-18!70;UBERON:0002193!1.97e-12!48;UBERON:0002390!3.90e-11!45;UBERON:0003061!3.90e-11!45;UBERON:0001474!2.79e-09!22;UBERON:0004765!2.79e-09!22;UBERON:0001434!2.79e-09!22;UBERON:0005057!3.88e-09!51;UBERON:0002371!6.76e-09!16;UBERON:0000926!7.77e-07!193;UBERON:0004120!7.77e-07!193;UBERON:0006603!7.77e-07!193;UBERON:0002365!8.27e-07!25;UBERON:0002330!8.27e-07!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.25e-23,16;UBERON:0002193,5.58e-21,48;UBERON:0002405,5.58e-21,48;UBERON:0001474,3.39e-20,22;UBERON:0004765,3.39e-20,22;UBERON:0001434,3.39e-20,22;UBERON:0002390,3.17e-17,45;UBERON:0003061,3.17e-17,45;UBERON:0002204,2.70e-13,32;UBERON:0002106,9.51e-11,6;UBERON:0004457,9.51e-11,6;UBERON:0000042,9.51e-11,6;UBERON:0004854,9.51e-11,6;UBERON:0009034,9.51e-11,6;UBERON:0002095,9.51e-11,6;UBERON:0004782,9.51e-11,6;UBERON:0003281,9.51e-11,6;UBERON:0009664,9.51e-11,6;UBERON:0002296,9.51e-11,6;UBERON:0005602,9.51e-11,6;UBERON:0001179,9.51e-11,6;UBERON:0006293,9.51e-11,6;UBERON:0003081,3.85e-10,87;UBERON:0002384,3.87e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.82227740650843,0,1.89277299214943,0.959801035240171,2.12194825899015,0,0,0,0,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,13.0485459005803,14.8329954385046,14.209602298922,1.49800055259202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,13.7237078333001,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97595103761946,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,1.1858105083486,0,0.393117990226406,0,0.405720242777006,0.241177159752417,0,0.287696137450811,0.162135226775035,0.823684239564244,0,1.86070473834252,0.312037673114561,0.505157755894224,0.538192240565737,2.41221760681684,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0.518054945597687,0,7.53956419696361,11.4220193601929,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,5.46786818553129,0,0.555583582109135,1.31857919903284,2.05041341581538,8.23601423543482,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0.247960367176008,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.504832249740738,0.381034033274999,0.705783295957884,0.0974578807397524,1.15454209968395,0,0,0,0,0,0.772758376128762,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.82227740650843,0,1.89277299214943,0.959801035240171,2.12194825899015,0,0,0,0,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,13.0485459005803,14.8329954385046,14.209602298922,1.49800055259202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,13.7237078333001,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97595103761946,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,1.1858105083486,0,0.393117990226406,0,0.405720242777006,0.241177159752417,0,0.287696137450811,0.162135226775035,0.823684239564244,0,1.86070473834252,0.312037673114561,0.505157755894224,0.538192240565737,2.41221760681684,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0.518054945597687,0,7.53956419696361,11.4220193601929,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,5.46786818553129,0,0.555583582109135,1.31857919903284,2.05041341581538,8.23601423543482,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0.247960367176008,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.504832249740738,0.381034033274999,0.705783295957884,0.0974578807397524,1.15454209968395,0,0,0,0,0,0.772758376128762,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chrX:20506928..20506955,- | |short_description=p@chrX:20506928..20506955,- | ||
}} | }} |
Latest revision as of 05:47, 6 August 2015
Short description: | p@chrX:20506928..20506955, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:20506928..20506955, - |
Coexpression cluster: | MCL_coexpression_mm9:1257 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.73e-14 | 13 |
bone marrow cell | 1.64e-13 | 3 |
mesenchymal stem cell of the bone marrow | 1.64e-13 | 3 |
myeloid cell | 2.90e-11 | 16 |
megakaryocyte progenitor cell | 1.43e-10 | 6 |
megakaryocyte | 1.43e-10 | 6 |
monopoietic cell | 1.45e-09 | 4 |
myeloid leukocyte | 1.45e-09 | 4 |
phagocyte | 1.45e-09 | 4 |
monocyte | 1.45e-09 | 4 |
macrophage | 1.45e-09 | 4 |
tissue-resident macrophage | 1.45e-09 | 4 |
macrophage dendritic cell progenitor | 1.45e-09 | 4 |
monoblast | 1.45e-09 | 4 |
promonocyte | 1.45e-09 | 4 |
common myeloid progenitor | 2.35e-09 | 19 |
bone marrow macrophage | 2.90e-09 | 2 |
connective tissue cell | 3.87e-07 | 46 |
mesenchymal cell | 3.87e-07 | 46 |
megakaryocyte-erythroid progenitor cell | 4.41e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 6.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.25e-23 | 16 |
hemolymphoid system | 5.58e-21 | 48 |
immune system | 5.58e-21 | 48 |
bone element | 3.39e-20 | 22 |
skeletal element | 3.39e-20 | 22 |
skeletal system | 3.39e-20 | 22 |
hematopoietic system | 3.17e-17 | 45 |
blood island | 3.17e-17 | 45 |
musculoskeletal system | 2.70e-13 | 32 |
spleen | 9.51e-11 | 6 |
cavity lining | 9.51e-11 | 6 |
serous membrane | 9.51e-11 | 6 |
gastrointestinal system mesentery | 9.51e-11 | 6 |
stomach region | 9.51e-11 | 6 |
mesentery | 9.51e-11 | 6 |
gastrointestinal system serosa | 9.51e-11 | 6 |
mesentery of stomach | 9.51e-11 | 6 |
gut mesentery | 9.51e-11 | 6 |
dorsal mesentery | 9.51e-11 | 6 |
dorsal mesogastrium | 9.51e-11 | 6 |
peritoneal cavity | 9.51e-11 | 6 |
spleen primordium | 9.51e-11 | 6 |
lateral plate mesoderm | 3.85e-10 | 87 |
connective tissue | 3.87e-07 | 46 |