FFCP PHASE1:Hg19::chr10:91316607..91316610,+: Difference between revisions
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|id=chr10:91316607..91316610,+
|short_description=p@chr10:91316607..91316610,+
|description=CAGE_peak_at_chr10:91316607..91316610,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:91316607..91316610,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_at_chr10:91316607..91316610,+ | |||
|id=chr10:91316607..91316610,+ | |||
|ontology_enrichment_celltype=CL:0002602!2.59e-12!2;CL:0000064!1.40e-08!3;CL:0005012!1.40e-08!3;CL:0000067!1.40e-08!3;CL:0002304!1.40e-08!3;CL:0002681!1.02e-07!13;CL:0002584!1.02e-07!13;CL:0000666!7.27e-07!4;CL:0002188!7.27e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.52e-50;2!UBERON:0003918;2.87e-11;10!UBERON:0007687;2.87e-11;10 | |||
|ontology_enrichment_disease=DOID:4468!2.32e-12!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.34e-23!1;UBERON:0002113!1.16e-20!27;UBERON:0003918!1.16e-20!27;UBERON:0005095!1.16e-20!27;UBERON:0007687!1.16e-20!27;UBERON:0000489!1.77e-17!32;UBERON:0006554!8.93e-13!44;UBERON:0001008!1.70e-12!45;UBERON:0006555!2.31e-12!17;UBERON:0005103!2.31e-12!17;UBERON:0000083!2.31e-12!17;UBERON:0009201!2.31e-12!17;UBERON:0004819!2.31e-12!17;UBERON:0006553!2.31e-12!17;UBERON:0003074!2.31e-12!17;UBERON:0003060!2.31e-12!17;UBERON:0009568!2.59e-12!2;UBERON:0002216!2.59e-12!2;UBERON:0002209!2.59e-12!2;UBERON:0002213!2.59e-12!2;UBERON:0004267!2.59e-12!2;UBERON:0006444!2.59e-12!2;UBERON:0001995!2.59e-12!2;UBERON:0004715!2.59e-12!2;UBERON:0001468!2.59e-12!2;UBERON:0001130!2.59e-12!2;UBERON:0001066!2.59e-12!2;UBERON:0000080!1.03e-11!18;UBERON:0002120!1.03e-11!18;UBERON:0004875!1.03e-11!18;UBERON:0005721!1.03e-11!18;UBERON:0005754!1.03e-11!18;UBERON:0007297!1.03e-11!18;UBERON:0004876!1.31e-10!20;UBERON:0005172!2.96e-10!55;UBERON:0005173!2.96e-10!55;UBERON:0003887!3.92e-10!21;UBERON:0002417!2.92e-09!61;UBERON:0000916!2.92e-09!61;UBERON:0006947!8.96e-09!3;UBERON:0004054!8.96e-09!3;UBERON:0002418!1.21e-08!3;UBERON:0004755!1.21e-08!3;UBERON:0001778!1.40e-08!3;UBERON:0001775!1.40e-08!3;UBERON:0000058!2.65e-08!26;UBERON:0003103!3.36e-08!69;UBERON:0001225!1.02e-07!13;UBERON:0008987!1.02e-07!13;UBERON:0005177!1.99e-07!107;UBERON:0005904!6.87e-07!4;UBERON:0000488!9.63e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.55e-98;1!UBERON:0006947;5.04e-34;3!UBERON:0004054;5.04e-34;3!UBERON:0005904;6.30e-26;4!UBERON:0000058;2.87e-11;10!UBERON:0003135;2.27e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.55e-98,1;UBERON:0006947,5.96e-34,3;UBERON:0004054,5.96e-34,3;UBERON:0005904,7.14e-26,4;UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0005103,1.07e-13,8;UBERON:0000083,1.07e-13,8;UBERON:0009201,1.07e-13,8;UBERON:0006553,1.07e-13,8;UBERON:0003074,1.07e-13,8;UBERON:0003060,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0006554,1.08e-09,47;UBERON:0003887,1.33e-09,12;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0006555,1.54e-07,16;UBERON:0004819,1.54e-07,16;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p@chr10:91316607..91316610,+ | |||
}} | }} |
Latest revision as of 16:40, 23 July 2015
Short description: | p@chr10:91316607..91316610, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:91316607..91316610, + |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.55e-98 | 1 |
male genital duct | 5.96e-34 | 3 |
internal male genitalia | 5.96e-34 | 3 |
duct of male reproductive system | 7.14e-26 | 4 |
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
mesonephric epithelium | 1.07e-13 | 8 |
mesonephric tubule | 1.07e-13 | 8 |
nephric duct | 1.07e-13 | 8 |
renal duct | 1.07e-13 | 8 |
mesonephric duct | 1.07e-13 | 8 |
pronephric duct | 1.07e-13 | 8 |
mesonephros | 2.45e-12 | 9 |
pronephros | 2.45e-12 | 9 |
nephrogenic cord | 2.45e-12 | 9 |
pronephric mesoderm | 2.45e-12 | 9 |
rostral part of nephrogenic cord | 2.45e-12 | 9 |
presumptive pronephric mesoderm | 2.45e-12 | 9 |
male reproductive organ | 2.37e-10 | 11 |
urogenital ridge | 2.37e-10 | 11 |
urinary system structure | 1.08e-09 | 47 |
intraembryonic coelom | 1.33e-09 | 12 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
excretory tube | 1.54e-07 | 16 |
kidney epithelium | 1.54e-07 | 16 |
compound organ | 4.47e-07 | 68 |