FFCP PHASE1:Hg19::chr11:101981423..101981503,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:101981423..101981503,+
|short_description=p3@YAP1
|description=CAGE_peak_3_at_YAP1_5end
|association_with_transcript=-76bp_to_ENST00000531439_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10413 | |EntrezGene=10413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |HGNC=16262 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_ENST00000531439_5end | |||
|cluster_id=chr11:101981423..101981503,+ | |||
|coexpression_cluster_id=C2089 | |||
|description=CAGE_peak_3_at_YAP1_5end | |||
|id=chr11:101981423..101981503,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.27e-14!180;CL:0000057!2.57e-08!75;CL:0002334!4.15e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.28e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.88e-09,76;CL:0002334,3.87e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.62e-17!347;UBERON:0003104!5.08e-15!238;UBERON:0009142!5.08e-15!238;UBERON:0000468!2.80e-14!659;UBERON:0004119!4.53e-14!169;UBERON:0000925!4.53e-14!169;UBERON:0006595!4.53e-14!169;UBERON:0001007!2.31e-12!155;UBERON:0001555!2.31e-12!155;UBERON:0007026!2.31e-12!155;UBERON:0002100!5.49e-11!216;UBERON:0000475!6.66e-11!365;UBERON:0000922!4.20e-10!612;UBERON:0004921!4.35e-09!129;UBERON:0004185!4.35e-09!129;UBERON:0000077!5.54e-09!130;UBERON:0001048!1.38e-08!168;UBERON:0002050!2.97e-08!605;UBERON:0005423!2.97e-08!605;UBERON:0005156!4.17e-08!59;UBERON:0000990!4.17e-08!59;UBERON:0005256!5.40e-08!143;UBERON:0000467!5.50e-08!625;UBERON:0000923!5.97e-08!604;UBERON:0005291!5.97e-08!604;UBERON:0006598!5.97e-08!604;UBERON:0002532!5.97e-08!604;UBERON:0004923!7.65e-08!57;UBERON:0000480!7.65e-08!626;UBERON:0001737!1.17e-07!9;UBERON:0000062!1.40e-07!511;UBERON:0000064!2.15e-07!219;UBERON:0003133!5.41e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.06e-07;9!UBERON:0001557;1.06e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.85e-15,160;UBERON:0000925,2.85e-15,160;UBERON:0006595,2.85e-15,160;UBERON:0001007,2.43e-13,145;UBERON:0001555,2.43e-13,145;UBERON:0007026,2.43e-13,145;UBERON:0003104,5.37e-11,160;UBERON:0009142,5.37e-11,160;UBERON:0002100,4.77e-10,199;UBERON:0004921,1.17e-09,118;UBERON:0001048,6.73e-09,160;UBERON:0004923,1.01e-08,66;UBERON:0000922,1.87e-08,592;UBERON:0005156,3.54e-08,59;UBERON:0000990,3.54e-08,59;UBERON:0005256,9.74e-08,122;UBERON:0001737,1.08e-07,9;UBERON:0005423,4.27e-07,581;UBERON:0003133,4.65e-07,48 | |||
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| ||
|short_description=p3@YAP1 | |||
}} | }} |
Latest revision as of 16:25, 24 September 2015
Short description: | p3@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YAP1_5end |
Coexpression cluster: | C2089_pharyngeal_epidermoid_Hep2_rectal_Prostate_gastric_Adipocyte |
Association with transcript: | -76bp_to_ENST00000531439_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.88e-09 | 76 |
preadipocyte | 3.87e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.85e-15 | 160 |
endoderm | 2.85e-15 | 160 |
presumptive endoderm | 2.85e-15 | 160 |
digestive system | 2.43e-13 | 145 |
digestive tract | 2.43e-13 | 145 |
primitive gut | 2.43e-13 | 145 |
mesenchyme | 5.37e-11 | 160 |
entire embryonic mesenchyme | 5.37e-11 | 160 |
trunk | 4.77e-10 | 199 |
subdivision of digestive tract | 1.17e-09 | 118 |
primordium | 6.73e-09 | 160 |
organ component layer | 1.01e-08 | 66 |
embryo | 1.87e-08 | 592 |
reproductive structure | 3.54e-08 | 59 |
reproductive system | 3.54e-08 | 59 |
trunk mesenchyme | 9.74e-08 | 122 |
larynx | 1.08e-07 | 9 |
developing anatomical structure | 4.27e-07 | 581 |
reproductive organ | 4.65e-07 | 48 |