FFCP PHASE1:Hg19::chr17:79609341..79609358,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83882 | |EntrezGene=83882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29942 | |HGNC=29942 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1Z9,Q6PJ65 | |UniProt=Q9H1Z9,Q6PJ65 | ||
|association_with_transcript=0bp_to_ENST00000328585,NM_031945,uc002kaw.1,uc010did.1,uc010die.2_5end | |association_with_transcript=0bp_to_ENST00000328585,NM_031945,uc002kaw.1,uc010did.1,uc010die.2_5end | ||
|cluster_id=chr17:79609341..79609358,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_1_at_TSPAN10_5end | |description=CAGE_peak_1_at_TSPAN10_5end | ||
|id=chr17:79609341..79609358,+ | |id=chr17:79609341..79609358,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.84e-17!180;CL:0000057!2.40e-09!75;CL:0002620!3.67e-09!23;CL:0000147!1.20e-08!14;CL:0000548!5.42e-08!679;CL:0000004!5.42e-08!679;CL:0000255!5.42e-08!679;CL:0000012!1.21e-07!682;CL:0000220!2.14e-07!246;CL:0002321!4.00e-07!248;CL:0000148!4.04e-07!10;CL:0000541!4.04e-07!10 | |ontology_enrichment_celltype=CL:0000055!2.84e-17!180;CL:0000057!2.40e-09!75;CL:0002620!3.67e-09!23;CL:0000147!1.20e-08!14;CL:0000548!5.42e-08!679;CL:0000004!5.42e-08!679;CL:0000255!5.42e-08!679;CL:0000012!1.21e-07!682;CL:0000220!2.14e-07!246;CL:0002321!4.00e-07!248;CL:0000148!4.04e-07!10;CL:0000541!4.04e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000147;7.13e-13;14!CL:0002620;4.42e-10;23!CL:0000148;7.09e-10;10!CL:0000622;1.11e-07;5!CL:0000149;1.18e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,9.60e-13,14;CL:0002620,5.00e-10,23;CL:0000148,9.53e-10,10;CL:0000541,9.53e-10,10;CL:0000149,1.20e-07,4;CL:0000622,1.38e-07,5;CL:0002077,4.77e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.94e-12!95;UBERON:0002097!5.05e-10!40;UBERON:0002199!6.22e-10!45;UBERON:0002416!6.22e-10!45;UBERON:0000914!8.44e-07!83;UBERON:0002329!8.44e-07!83;UBERON:0003077!8.44e-07!83;UBERON:0003059!8.44e-07!83;UBERON:0007282!8.44e-07!83;UBERON:0009618!8.44e-07!83;UBERON:0007285!8.44e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.34e-09;41!UBERON:0001737;4.05e-08;9!UBERON:0001557;4.05e-08;9!UBERON:0002199;9.49e-07;46!UBERON:0002416;9.49e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.33e-12,41;UBERON:0003102,2.07e-10,99;UBERON:0002199,9.13e-10,46;UBERON:0002416,9.13e-10,46;UBERON:0001737,2.77e-08,9 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0.74259811776028,0.662794751455832,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,1.8072355126695,0.369754010166788,0,0,0,0,0,0,0.895661896959697,10.0407036465884,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,0.50133791063589,0.579386075843295,1.5905718941022,0,0,0,0,0,0,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,8.474187572046,1.43418310374407,1.41867352879343,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,1.18800285728205,0.989067717114227,0.910161361938026,1.43723628363248,0,0.125118519871964,0,2.63386572528503,1.83892677479412,0.300476117813194,0,4.84352016359927,1.2813443329114,1.69545520927649,2.10063767259082,0.824420233907511,1.03056216018252,2.23340227597908,8.94514560878711,3.99491721160914,3.28163906517349,1.28869858099219,0.161646056818812,11.3603069605317,4.03008392910561,2.54340888465731,1.54608682530637,1.09098448236334,0.573609190778008,0,0,0.464775771478074,1.0366105501537,0,0,0,0.643240938192885,2.76269842704961,0,1.44375896333917,2.48444280083672,2.36018566109342,1.68707720918437,2.09558548191549,0.871517776369625,1.89816495288877,1.21348177344148,2.94332197688019,2.30848294167834,0,0,0,0,0,0,0,0,0.245976877086227,0,3.07300799144152,0,0.402115889646523,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0.577465791044295,0,0,0,0,0.984868024349589,0,0,1.87467667973554,2.51973192298289,0.567100388969546,0.268675568108545,0,0,0,0,0,0,0.12624243342638,99.6916940387054,129.876064689814,127.767017458951,106.064916534077,36.1952774315699,218.649746110372,261.81701228961,0,0,0,5.8172272091,7.15312891703765,0,2.92531928243358,3.12022310734098,0,0,0.799266537048298,0,0,0,0,0,0,2.41151501647669,4.35766729300147,0.499864955910285,7.29742683847143,1.00451418286425,4.21667878966063,0.718874566474748,2.29723871668228,5.70547620162874,2.02693829334611,1.2328579353023,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,2.40756879782175,11.3703752027992,1.03473071292505,0.664225598535437,3.50301420229236,5.64743494042539,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0.280660094433074,0.128139149255701,1.02341449813341,0.482561763430822,0,0.616838775210622,0.710246901252508,1.97105174433142,0.519254429183621,1.62694529843943,0.120859449591622,0.802025881213139,0.0920809889358963,0.459257792658427,0.364182336013434,1.04899531967539,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,80.7817894116626,41.0018307124632,134.055898601693,0,0,0,1.14853107599234,4.55042172225565,0,0.676695028044854,0.154048617114644,0.15350367472613,0,0.322260734604821,0.145016693914229,0,0.0890320356467374,0.330569830721956,0,0,0.10115778085555,0.929691098594572,12.5924938732256,0.6970372701606,0,0.532306030317022,1.73986598415015,0.18532421910392,0,0,0,1.33441135746677,1.27948895655667,0,1.90921948755562,0,1.07923474549989,0.274537029736055,0.117812402345686,1.61745985258653,0,1.68503382495592,0,0.243713489631284,0,0,0.424216295861138,1.13008116620243,0,0,0,1.73632660280006,1.31178950409327,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0.7133421029625,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,17.7327958071605,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17232857241224,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0.102268682502155,0,2.17727711363265,0.0898683511473268,0,0.511572370226872,0,0,3.33410970433911,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,4.0432885840795,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,1.63232808159148,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.587954384486266,0,0,0.343972064943233,0.19351266257817,0,0.0821154570532092,0.969890164884194,0,37.9647644511295,0.274083849293502,0,0,1.75996244461323,0.561111741760736,0,0.19980960958213,0,0,0,0,0.745515213392595,4.71388069233591,1.49494626680975,0.627617077873999,0,7.22376474753797,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0.25426853765475,8.6879936280594,4.32110745600634,4.89881040164114,8.38111340937412,0,28.7955756817363,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,1.9846640872478,0,0,1.27668251554036,0,1.0027595760908,0,0,0,0.886068179966986,0,0,0.573409195690071,0,0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| ||
|short_description=p1@TSPAN10 | |short_description=p1@TSPAN10 | ||
}} | }} |
Latest revision as of 07:53, 18 September 2015
Short description: | p1@TSPAN10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSPAN10_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000328585, NM_031945, uc002kaw.1, uc010did.1, uc010die.2_5end |
EntrezGene: | TSPAN10 |
HGNC: | 29942 |
UniProt: | Q9H1Z9Q6PJ65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 9.60e-13 | 14 |
skin fibroblast | 5.00e-10 | 23 |
melanocyte | 9.53e-10 | 10 |
melanoblast | 9.53e-10 | 10 |
visual pigment cell | 1.20e-07 | 4 |
acinar cell | 1.38e-07 | 5 |
ecto-epithelial cell | 4.77e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.33e-12 | 41 |
surface structure | 2.07e-10 | 99 |
integument | 9.13e-10 | 46 |
integumental system | 9.13e-10 | 46 |
larynx | 2.77e-08 | 9 |