FFCP PHASE1:Hg19::chr18:53255323..53255332,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=P15884 | |UniProt=P15884 | ||
|association_with_transcript=110bp_to_M74719_5end | |association_with_transcript=110bp_to_M74719_5end | ||
|cluster_id=chr18:53255323..53255332,- | |||
|description=CAGE_peak_31_at_TCF4_5end | |description=CAGE_peak_31_at_TCF4_5end | ||
|id=chr18:53255323..53255332,- | |id=chr18:53255323..53255332,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002580;2.70e-14;3!CL:0002579;8.48e-14;3!CL:0002334;7.02e-13;12!CL:0000047;3.75e-10;2!CL:0000784;1.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,3.11e-14,3;CL:0002579,9.98e-14,3;CL:0002334,8.12e-13,12;CL:0000784,1.76e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.01e-15;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.91e-16!86;UBERON:0001017!3.52e-16!82;UBERON:0000073!4.67e-16!94;UBERON:0001016!4.67e-16!94;UBERON:0001049!1.39e-15!57;UBERON:0005068!1.39e-15!57;UBERON:0006241!1.39e-15!57;UBERON:0007135!1.39e-15!57;UBERON:0002616!4.06e-14!59;UBERON:0000955!5.17e-14!69;UBERON:0006238!5.17e-14!69;UBERON:0003080!4.42e-13!42;UBERON:0002780!1.56e-12!41;UBERON:0001890!1.56e-12!41;UBERON:0006240!1.56e-12!41;UBERON:0001869!2.96e-12!32;UBERON:0003075!8.42e-12!86;UBERON:0007284!8.42e-12!86;UBERON:0001893!1.26e-11!34;UBERON:0002619!2.09e-11!22;UBERON:0002020!2.55e-11!34;UBERON:0003528!2.55e-11!34;UBERON:0002791!4.95e-11!33;UBERON:0000956!5.03e-11!25;UBERON:0000203!5.03e-11!25;UBERON:0002346!8.61e-11!90;UBERON:0001950!4.15e-10!20;UBERON:0003056!4.71e-08!61;UBERON:0000033!4.99e-07!123;UBERON:0000153!5.18e-07!129;UBERON:0007811!5.18e-07!129;UBERON:0004121!8.94e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.32e-12;6!UBERON:0002358;6.32e-12;6!UBERON:0003684;6.32e-12;6!UBERON:0001178;6.32e-12;6!UBERON:0002619;8.96e-09;22!UBERON:0002680;1.36e-08;9!UBERON:0001895;1.36e-08;9!UBERON:0004457;5.56e-08;9!UBERON:0000042;5.56e-08;9!UBERON:0002037;7.86e-08;6!UBERON:0000956;1.19e-07;25!UBERON:0000203;1.19e-07;25!UBERON:0000310;2.23e-07;10!UBERON:0001950;2.89e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.01e-12,6;UBERON:0002358,8.01e-12,6;UBERON:0003684,8.01e-12,6;UBERON:0001178,8.01e-12,6;UBERON:0002619,1.09e-08,22;UBERON:0002680,1.34e-08,9;UBERON:0001895,1.34e-08,9;UBERON:0010092,1.34e-08,9;UBERON:0000073,4.67e-08,53;UBERON:0002616,4.67e-08,53;UBERON:0002037,8.94e-08,6;UBERON:0006215,8.94e-08,6;UBERON:0000956,1.40e-07,25;UBERON:0000203,1.40e-07,25;UBERON:0001049,1.60e-07,56;UBERON:0005068,1.60e-07,56;UBERON:0006241,1.60e-07,56;UBERON:0007135,1.60e-07,56;UBERON:0000310,2.19e-07,10;UBERON:0001950,3.13e-07,20 | |||
|phase1_expression=0.54503513781167,1.2846031433459,1.12763523276777,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0.619737604642413,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,1.27867425159808,0,0,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,1.70763890732835,1.17447437874188,0.764546456250458,2.64342657158052,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.724232594804119,0.795285947051099,0.973269740605272,0.189069634328136,0,0.263504357079378,0.196468613246569,0,0,0,0,0,2.8618874916641,8.00792875092179,0.74291500265913,0.596287222100115,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0,1.33888245105868,0,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.900891843866578,0,0,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0.397227542439656,0.573673241497627,0,0,1.06748995729705,0,0.311211035399766,0.404132016209064,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0,0.744467425326359,1.18143432568886,0.584622030967192,0.504867548488229,0.644349290496095,0,0.355009592516614,0.604512589365842,0.339121184620975,0,0,0,0,0.397589304964456,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.646358578788889,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0.128343036279748,1.77866236955724,2.60279707715243,0,0.502548796003046,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0,0.315404830067869,0,0.300946099727719,0,0,0.664225598535437,0,0.347534457872331,0,0,0.413536052245775,0,0,0,0,0,1.24053903909388,3.22270143904931,1.12264037773229,1.92208723883551,1.02341449813341,1.12597744800525,0,0.308419387605311,0.710246901252508,0.164254312027618,0,0.116210378459959,0.362578348774867,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0.183138929636687,0.330037999682352,0,0,0,0.676695028044854,0,0,0.137836572484531,0.537101224341368,0.145016693914229,0.426133137080504,0.356128142586949,0,0.192190067365106,0.127612712494584,0,0.464845549297286,0.31481234683064,0.6970372701606,0.616067160352178,0,0.869932992075073,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0.823611089208164,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,3.15865397713722,1.00988449083511,0.0711418433484141,0,0,0,0.635020748171649,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0,0,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0,0,0,0,0.19924798825107,0.276283915531148,0,0.920418142519393,0.246169610922139,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0.520874984799877,0,0.361789315876224,3.05163472634166,4.09143261745531,2.06883333267483,0.658156191461918,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.332423363800313,0,0.19606253431774,0,0.37950746544837,0,0,0,0.424059214301822,0.432777279484182,0,0,0,0.889563386041866,0.247127877893006,0.835375596043643,0.202203398942031,0,0.468528891450678,0.729819156862664,0,0,0.789168805698781,1.20990716048664,2.44858209304392,0.189559738885464,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0.176512253383001,0,0.411125773940253,0.596143835108969,0.823040347426423,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,0,0.543616824294456,0.209205692624666,0.101998217636322,0,0.600420288709789,0.136905378891993,2.55493176133945,0.429765441419957,0,0.558564802544508,0.68748127203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| ||
|short_description=p31@TCF4 | |short_description=p31@TCF4 | ||
}} | }} |
Latest revision as of 21:22, 19 September 2015
Short description: | p31@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_M74719_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | P15884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 3.11e-14 | 3 |
omentum preadipocyte | 9.98e-14 | 3 |
preadipocyte | 8.12e-13 | 12 |
plasmacytoid dendritic cell | 1.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.01e-12 | 6 |
peritoneum | 8.01e-12 | 6 |
abdominal cavity | 8.01e-12 | 6 |
visceral peritoneum | 8.01e-12 | 6 |
regional part of cerebral cortex | 1.09e-08 | 22 |
regional part of metencephalon | 1.34e-08 | 9 |
metencephalon | 1.34e-08 | 9 |
future metencephalon | 1.34e-08 | 9 |
regional part of nervous system | 4.67e-08 | 53 |
regional part of brain | 4.67e-08 | 53 |
cerebellum | 8.94e-08 | 6 |
rhombic lip | 8.94e-08 | 6 |
cerebral cortex | 1.40e-07 | 25 |
pallium | 1.40e-07 | 25 |
neural tube | 1.60e-07 | 56 |
neural rod | 1.60e-07 | 56 |
future spinal cord | 1.60e-07 | 56 |
neural keel | 1.60e-07 | 56 |
breast | 2.19e-07 | 10 |
neocortex | 3.13e-07 | 20 |