FFCP PHASE1:Hg19::chr13:32835912..32835936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:32835912..32835936,+ | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr13:32835912..32835936,+ | |description=CAGE_peak_at_chr13:32835912..32835936,+ | ||
|id=chr13:32835912..32835936,+ | |id=chr13:32835912..32835936,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.81e-36!24;CL:0000115!6.70e-34!35;CL:0000071!3.97e-28!18;CL:0002546!3.97e-28!18;CL:0002078!1.03e-24!44;CL:0000213!4.82e-18!57;CL:0000215!4.82e-18!57;CL:0000222!1.86e-17!119;CL:1000413!1.05e-14!9;CL:0002543!1.05e-10!6;CL:0002544!2.02e-10!6;CL:0005020!7.35e-10!6;CL:0002138!7.35e-10!6;CL:0005022!7.35e-10!6;CL:0000220!6.63e-07!246;CL:0002321!9.87e-07!248 | |ontology_enrichment_celltype=CL:0002139!1.81e-36!24;CL:0000115!6.70e-34!35;CL:0000071!3.97e-28!18;CL:0002546!3.97e-28!18;CL:0002078!1.03e-24!44;CL:0000213!4.82e-18!57;CL:0000215!4.82e-18!57;CL:0000222!1.86e-17!119;CL:1000413!1.05e-14!9;CL:0002543!1.05e-10!6;CL:0002544!2.02e-10!6;CL:0005020!7.35e-10!6;CL:0002138!7.35e-10!6;CL:0005022!7.35e-10!6;CL:0000220!6.63e-07!246;CL:0002321!9.87e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.79e-106;24!CL:0000071;2.95e-88;18!CL:0000115;3.05e-86;36!CL:0002078;2.01e-52;45!CL:1000413;3.17e-44;9!CL:0000213;6.60e-39;58!CL:0000215;6.60e-39;58!CL:0002543;3.35e-31;6!CL:0002544;3.28e-30;6!CL:0002138;3.77e-20;6!CL:0002618;2.07e-16;3!CL:0002144;8.13e-16;3!CL:0000076;7.15e-14;63!CL:0002545;4.99e-11;2!CL:0002188;9.70e-10;5!CL:0000708;3.24e-07;3!CL:1000746;4.50e-07;7!CL:1000612;4.50e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.06e-106,24;CL:0000115,5.19e-104,36;CL:0000071,2.37e-88,18;CL:0002546,2.37e-88,18;CL:0002078,5.57e-82,45;CL:0000213,3.21e-62,58;CL:0000215,3.21e-62,58;CL:1000413,2.88e-44,9;CL:0002543,3.28e-31,6;CL:0002544,2.76e-30,6;CL:0000222,1.05e-28,121;CL:0000076,3.09e-22,63;CL:0005020,2.90e-20,6;CL:0002138,2.90e-20,6;CL:0005022,2.90e-20,6;CL:0002618,1.97e-16,3;CL:0002144,7.37e-16,3;CL:0002321,1.30e-13,250;CL:0000066,2.04e-12,253;CL:0002545,4.30e-11,2;CL:0002188,9.57e-10,5;CL:0000708,2.42e-07,3;CL:1000746,4.46e-07,7;CL:1000612,4.46e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;2.95e-88;18!CL:0005022;3.77e-20;6!CL:0000222;2.65e-12;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.97e-28!18;UBERON:0004638!3.97e-28!18;UBERON:0004852!3.97e-28!18;UBERON:0002049!2.03e-25!79;UBERON:0007798!2.03e-25!79;UBERON:0000487!8.77e-22!22;UBERON:0001009!3.61e-21!113;UBERON:0004535!3.91e-21!110;UBERON:0000055!7.06e-21!69;UBERON:0006914!2.22e-18!25;UBERON:0001981!2.20e-16!60;UBERON:0007500!2.20e-16!60;UBERON:0004537!2.20e-16!60;UBERON:0006965!2.20e-16!60;UBERON:0004872!3.05e-16!84;UBERON:0003914!6.56e-15!118;UBERON:0003915!1.05e-14!9;UBERON:0004700!1.05e-14!9;UBERON:0001917!1.05e-14!9;UBERON:0000119!1.51e-14!312;UBERON:0004111!2.06e-13!241;UBERON:0000483!5.99e-13!309;UBERON:0000490!8.30e-13!138;UBERON:0000477!2.42e-12!286;UBERON:0000025!3.41e-10!194;UBERON:0001638!1.69e-08!9;UBERON:0003920!1.69e-08!9;UBERON:0004582!1.69e-08!9;UBERON:0001637!3.94e-08!42;UBERON:0003509!3.94e-08!42;UBERON:0004572!3.94e-08!42;UBERON:0000947!5.77e-08!21;UBERON:0010191!5.77e-08!21;UBERON:0002203!7.26e-08!6;UBERON:0001768!7.26e-08!6;UBERON:0001473!4.35e-07!8;UBERON:0004536!4.35e-07!8;UBERON:0006558!4.35e-07!8;UBERON:0002465!7.75e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.95e-88;18!UBERON:0001986;2.95e-88;18!UBERON:0004852;2.95e-88;18!UBERON:0000487;1.89e-71;22!UBERON:0006914;2.26e-62;25!UBERON:0003915;3.17e-44;9!UBERON:0004700;3.17e-44;9!UBERON:0001917;3.17e-44;9!UBERON:0000490;2.24e-42;33!UBERON:0000055;1.36e-21;65!UBERON:0001638;1.32e-20;9!UBERON:0003920;1.32e-20;9!UBERON:0004582;1.32e-20;9!UBERON:0007500;1.01e-17;56!UBERON:0001981;1.01e-17;56!UBERON:0004537;1.01e-17;56!UBERON:0010523;8.13e-16;3!UBERON:0001915;8.13e-16;3!UBERON:0001982;8.13e-16;3!UBERON:0001473;4.56e-15;8!UBERON:0004536;4.56e-15;8!UBERON:0006558;4.56e-15;8!UBERON:0002049;5.99e-15;75!UBERON:0007798;5.99e-15;75!UBERON:0003914;5.55e-14;74!UBERON:0000025;2.10e-12;93!UBERON:0002465;5.21e-12;10!UBERON:0005800;4.99e-11;2!UBERON:0001515;4.99e-11;2!UBERON:0002066;4.95e-10;5!UBERON:0001009;4.85e-09;112!UBERON:0004535;6.80e-09;109!UBERON:0004111;1.44e-08;130!UBERON:0000947;3.39e-08;21!UBERON:0010191;3.39e-08;21!UBERON:0001637;3.49e-08;42!UBERON:0003509;3.49e-08;42!UBERON:0004572;3.49e-08;42!UBERON:0003210;3.24e-07;3!UBERON:0000074;4.50e-07;7!UBERON:0001229;4.50e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.37e-88,18;UBERON:0001986,2.37e-88,18;UBERON:0004852,2.37e-88,18;UBERON:0000487,1.58e-71,22;UBERON:0006914,1.93e-62,25;UBERON:0003915,2.88e-44,9;UBERON:0004700,2.88e-44,9;UBERON:0001917,2.88e-44,9;UBERON:0000055,1.68e-37,68;UBERON:0002049,7.88e-35,78;UBERON:0007798,7.88e-35,78;UBERON:0007500,5.88e-27,59;UBERON:0001981,5.88e-27,59;UBERON:0004537,5.88e-27,59;UBERON:0006965,5.88e-27,59;UBERON:0004535,2.68e-23,109;UBERON:0001009,1.60e-22,112;UBERON:0001638,1.30e-20,9;UBERON:0003920,1.30e-20,9;UBERON:0004582,1.30e-20,9;UBERON:0004872,6.98e-18,83;UBERON:0003914,4.40e-16,117;UBERON:0010523,7.37e-16,3;UBERON:0001915,7.37e-16,3;UBERON:0001982,7.37e-16,3;UBERON:0001473,3.76e-15,8;UBERON:0004536,3.76e-15,8;UBERON:0006558,3.76e-15,8;UBERON:0004111,2.75e-12,240;UBERON:0002465,4.47e-12,10;UBERON:0005800,4.30e-11,2;UBERON:0001515,4.30e-11,2;UBERON:0000025,9.81e-11,192;UBERON:0000490,2.53e-10,148;UBERON:0002066,4.81e-10,5;UBERON:0000119,1.04e-09,309;UBERON:0001637,3.05e-08,42;UBERON:0003509,3.05e-08,42;UBERON:0004572,3.05e-08,42;UBERON:0000947,3.24e-08,21;UBERON:0010191,3.24e-08,21;UBERON:0000483,3.50e-08,306;UBERON:0003081,5.63e-08,203;UBERON:0003210,2.42e-07,3;UBERON:0010532,4.46e-07,7;UBERON:0000074,4.46e-07,7;UBERON:0001229,4.46e-07,7;UBERON:0001230,4.46e-07,7;UBERON:0003220,4.46e-07,7;UBERON:0005749,4.46e-07,7;UBERON:0004199,4.46e-07,7;UBERON:0004209,4.46e-07,7;UBERON:0004198,4.46e-07,7 | |||
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| ||
|short_description=p@chr13:32835912..32835936,+ | |short_description=p@chr13:32835912..32835936,+ | ||
}} | }} |
Latest revision as of 15:40, 24 July 2015
Short description: | p@chr13:32835912..32835936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:32835912..32835936, + |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.06e-106 | 24 |
endothelial cell | 5.19e-104 | 36 |
blood vessel endothelial cell | 2.37e-88 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.37e-88 | 18 |
meso-epithelial cell | 5.57e-82 | 45 |
lining cell | 3.21e-62 | 58 |
barrier cell | 3.21e-62 | 58 |
endothelial cell of artery | 2.88e-44 | 9 |
vein endothelial cell | 3.28e-31 | 6 |
aortic endothelial cell | 2.76e-30 | 6 |
mesodermal cell | 1.05e-28 | 121 |
squamous epithelial cell | 3.09e-22 | 63 |
lymphangioblast | 2.90e-20 | 6 |
endothelial cell of lymphatic vessel | 2.90e-20 | 6 |
vascular lymphangioblast | 2.90e-20 | 6 |
endothelial cell of umbilical vein | 1.97e-16 | 3 |
capillary endothelial cell | 7.37e-16 | 3 |
embryonic cell | 1.30e-13 | 250 |
epithelial cell | 2.04e-12 | 253 |
thoracic aorta endothelial cell | 4.30e-11 | 2 |
glomerular endothelial cell | 9.57e-10 | 5 |
leptomeningeal cell | 2.42e-07 | 3 |
glomerular cell | 4.46e-07 | 7 |
kidney corpuscule cell | 4.46e-07 | 7 |