FFCP PHASE1:Hg19::chr11:19456412..19456413,+: Difference between revisions
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|id=chr11:19456412..19456413,+
|short_description=p@chr11:19456412..19456413,+
|description=CAGE_peak_at_chr11:19456412..19456413,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:19456412..19456413,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr11:19456412..19456413,+ | |||
|id=chr11:19456412..19456413,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.30e-09!9;CL:0000594!8.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002561;1.07e-13;2!CL:0000594;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,9.40e-14,2;CL:0000594,1.19e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.92e-26;1!UBERON:0007297;1.07e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.07e-13;2!DOID:5409;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,7.30e-14,2;DOID:5409,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.28e-19!57;UBERON:0005068!9.28e-19!57;UBERON:0006241!9.28e-19!57;UBERON:0007135!9.28e-19!57;UBERON:0002780!1.60e-16!41;UBERON:0001890!1.60e-16!41;UBERON:0006240!1.60e-16!41;UBERON:0002616!1.77e-16!59;UBERON:0003080!5.61e-16!42;UBERON:0002020!1.90e-15!34;UBERON:0003528!1.90e-15!34;UBERON:0001893!2.24e-15!34;UBERON:0000955!6.29e-15!69;UBERON:0006238!6.29e-15!69;UBERON:0002791!1.73e-14!33;UBERON:0001017!2.85e-13!82;UBERON:0005743!2.88e-13!86;UBERON:0007023!4.08e-13!115;UBERON:0001869!4.58e-13!32;UBERON:0000073!6.15e-13!94;UBERON:0001016!6.15e-13!94;UBERON:0000475!6.92e-13!365;UBERON:0003075!1.72e-12!86;UBERON:0007284!1.72e-12!86;UBERON:0002346!1.53e-11!90;UBERON:0002308!2.22e-11!9;UBERON:0000125!2.22e-11!9;UBERON:0000153!1.10e-10!129;UBERON:0007811!1.10e-10!129;UBERON:0000483!2.03e-10!309;UBERON:0000033!3.76e-10!123;UBERON:0000119!3.78e-10!312;UBERON:0003056!4.31e-10!61;UBERON:0002619!5.10e-09!22;UBERON:0009663!7.14e-09!7;UBERON:0002420!8.73e-09!9;UBERON:0007245!8.73e-09!9;UBERON:0010009!8.73e-09!9;UBERON:0010011!8.73e-09!9;UBERON:0000454!8.73e-09!9;UBERON:0001950!1.25e-08!20;UBERON:0000481!3.12e-08!347;UBERON:0000064!3.52e-08!219;UBERON:0000956!1.25e-07!25;UBERON:0000203!1.25e-07!25;UBERON:0004121!9.33e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.92e-26;1!UBERON:0006868;5.92e-26;1!UBERON:0005933;1.07e-13;2!UBERON:0005942;1.07e-13;2!UBERON:0005932;1.07e-13;2!UBERON:0006947;1.41e-09;3!UBERON:0004054;1.41e-09;3!UBERON:0005904;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.93e-26,1;UBERON:0006868,5.93e-26,1;UBERON:0005933,9.40e-14,2;UBERON:0005942,9.40e-14,2;UBERON:0005932,9.40e-14,2;UBERON:0006947,1.41e-09,3;UBERON:0004054,1.41e-09,3;UBERON:0005904,1.69e-07,4 | |||
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| ||
|short_description=p@chr11:19456412..19456413,+ | |||
}} | }} |
Latest revision as of 20:48, 23 July 2015
Short description: | p@chr11:19456412..19456413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19456412..19456413, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 9.40e-14 | 2 |
skeletal muscle satellite cell | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.93e-26 | 1 |
seminal fluid secreting gland | 5.93e-26 | 1 |
hair root sheath | 9.40e-14 | 2 |
hair outer root sheath | 9.40e-14 | 2 |
bulb of hair follicle | 9.40e-14 | 2 |
male genital duct | 1.41e-09 | 3 |
internal male genitalia | 1.41e-09 | 3 |
duct of male reproductive system | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.30e-14 | 2 |
lung small cell carcinoma | 2.04e-07 | 4 |