FFCP PHASE1:Hg19::chr14:75079282..75079293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4053 | |EntrezGene=4053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |HGNC=6715 | ||
|TSSclassifier=strong | |||
|UniProt=G3V254 | |UniProt=G3V254 | ||
|association_with_transcript=12bp_to_ENST00000556359_5end | |association_with_transcript=12bp_to_ENST00000556359_5end | ||
|cluster_id=chr14:75079282..75079293,- | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_21_at_LTBP2_5end | |description=CAGE_peak_21_at_LTBP2_5end | ||
|id=chr14:75079282..75079293,- | |id=chr14:75079282..75079293,- | ||
|ontology_enrichment_celltype=CL:0000055!9.46e-16!180;CL:0002371!2.21e-14!591;CL:0000057!4.23e-14!75;CL:0000222!2.68e-13!119;CL:0000144!1.09e-12!625;CL:0000115!1.56e-11!35;CL:0002078!2.76e-11!44;CL:0002139!4.07e-11!24;CL:0000220!5.46e-11!246;CL:0000548!7.39e-11!679;CL:0000004!7.39e-11!679;CL:0000255!7.39e-11!679;CL:0002321!1.25e-10!248;CL:0000012!1.90e-10!682;CL:0000071!2.33e-10!18;CL:0002546!2.33e-10!18;CL:0002334!2.10e-08!12;CL:1000413!3.05e-08!9;CL:0000183!1.30e-07!59;CL:0000213!1.55e-07!57;CL:0000215!1.55e-07!57 | |ontology_enrichment_celltype=CL:0000055!9.46e-16!180;CL:0002371!2.21e-14!591;CL:0000057!4.23e-14!75;CL:0000222!2.68e-13!119;CL:0000144!1.09e-12!625;CL:0000115!1.56e-11!35;CL:0002078!2.76e-11!44;CL:0002139!4.07e-11!24;CL:0000220!5.46e-11!246;CL:0000548!7.39e-11!679;CL:0000004!7.39e-11!679;CL:0000255!7.39e-11!679;CL:0002321!1.25e-10!248;CL:0000012!1.90e-10!682;CL:0000071!2.33e-10!18;CL:0002546!2.33e-10!18;CL:0002334!2.10e-08!12;CL:1000413!3.05e-08!9;CL:0000183!1.30e-07!59;CL:0000213!1.55e-07!57;CL:0000215!1.55e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.29e-19;24!CL:0000071;8.38e-17;18!CL:0000115;1.16e-16;36!CL:1000413;5.38e-14;9!CL:0000244;1.32e-09;4!CL:0000731;1.32e-09;4!CL:0002334;3.64e-09;12!CL:0002544;5.13e-09;6!CL:0002543;1.54e-08;6!CL:0002078;7.12e-08;45!CL:0000213;8.23e-08;58!CL:0000215;8.23e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.52e-19,24;CL:0000115,1.83e-18,36;CL:0000071,3.27e-17,18;CL:0002546,3.27e-17,18;CL:1000413,1.75e-14,9;CL:0002078,1.28e-13,45;CL:0000222,1.30e-13,121;CL:0000213,1.37e-10,58;CL:0000215,1.37e-10,58;CL:0000244,7.96e-10,4;CL:0000731,7.96e-10,4;CL:0002544,3.71e-09,6;CL:0002334,6.15e-09,12;CL:0002543,1.44e-08,6;CL:0002321,6.40e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;8.38e-17;18 | |||
|ontology_enrichment_disease=DOID:2394!4.18e-09!14 | |ontology_enrichment_disease=DOID:2394!4.18e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.74e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.10e-20!79;UBERON:0007798!1.10e-20!79;UBERON:0000055!3.60e-19!69;UBERON:0001981!8.27e-19!60;UBERON:0007500!8.27e-19!60;UBERON:0004537!8.27e-19!60;UBERON:0006965!8.27e-19!60;UBERON:0003914!2.58e-17!118;UBERON:0004872!3.00e-16!84;UBERON:0001009!3.60e-16!113;UBERON:0004535!4.14e-16!110;UBERON:0001637!3.55e-15!42;UBERON:0003509!3.55e-15!42;UBERON:0004572!3.55e-15!42;UBERON:0001986!2.33e-10!18;UBERON:0004638!2.33e-10!18;UBERON:0004852!2.33e-10!18;UBERON:0004573!5.34e-10!33;UBERON:0004571!5.34e-10!33;UBERON:0005256!2.60e-09!143;UBERON:0000119!5.70e-09!312;UBERON:0000483!1.01e-08!309;UBERON:0000490!1.60e-08!138;UBERON:0000468!2.90e-08!659;UBERON:0003915!3.05e-08!9;UBERON:0004700!3.05e-08!9;UBERON:0001917!3.05e-08!9;UBERON:0000487!4.69e-08!22;UBERON:0000914!5.32e-08!83;UBERON:0002329!5.32e-08!83;UBERON:0003077!5.32e-08!83;UBERON:0003059!5.32e-08!83;UBERON:0007282!5.32e-08!83;UBERON:0009618!5.32e-08!83;UBERON:0007285!5.32e-08!83;UBERON:0000477!5.77e-08!286;UBERON:0000467!5.84e-08!625;UBERON:0006914!6.61e-08!25;UBERON:0000480!7.63e-08!626;UBERON:0002100!1.60e-07!216;UBERON:0000947!1.62e-07!21;UBERON:0010191!1.62e-07!21;UBERON:0000486!1.71e-07!82;UBERON:0003102!1.99e-07!95;UBERON:0004111!2.47e-07!241;UBERON:0000475!4.02e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.38e-17;18!UBERON:0001986;8.38e-17;18!UBERON:0004852;8.38e-17;18!UBERON:0003915;5.38e-14;9!UBERON:0004700;5.38e-14;9!UBERON:0001917;5.38e-14;9!UBERON:0000487;3.99e-13;22!UBERON:0001637;9.10e-13;42!UBERON:0003509;9.10e-13;42!UBERON:0004572;9.10e-13;42!UBERON:0007500;1.54e-11;56!UBERON:0001981;1.54e-11;56!UBERON:0004537;1.54e-11;56!UBERON:0006914;3.76e-11;25!UBERON:0000055;5.70e-10;65!UBERON:0002049;2.40e-09;75!UBERON:0007798;2.40e-09;75!UBERON:0000490;2.51e-09;33!UBERON:0004573;2.61e-08;33!UBERON:0004571;2.61e-08;33!UBERON:0010260;8.22e-08;9!UBERON:0000365;1.20e-07;5!UBERON:0003914;1.62e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,7.00e-21,78;UBERON:0007798,7.00e-21,78;UBERON:0000055,1.91e-20,68;UBERON:0007500,2.15e-19,59;UBERON:0001981,2.15e-19,59;UBERON:0004537,2.15e-19,59;UBERON:0006965,2.15e-19,59;UBERON:0004638,3.27e-17,18;UBERON:0001986,3.27e-17,18;UBERON:0004852,3.27e-17,18;UBERON:0001637,7.30e-16,42;UBERON:0003509,7.30e-16,42;UBERON:0004572,7.30e-16,42;UBERON:0004535,1.80e-15,109;UBERON:0004872,4.35e-15,83;UBERON:0001009,8.76e-15,112;UBERON:0003915,1.75e-14,9;UBERON:0004700,1.75e-14,9;UBERON:0001917,1.75e-14,9;UBERON:0000487,1.89e-13,22;UBERON:0003914,1.15e-12,117;UBERON:0006914,1.98e-11,25;UBERON:0004573,1.04e-08,33;UBERON:0004571,1.04e-08,33;UBERON:0000365,8.08e-08,5;UBERON:0010260,1.01e-07,9;UBERON:0000490,2.55e-07,148 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0.655324116390517,5.01157258634062,0.495065411840187,0.331397375727916,1.34465029290355,1.20538905604795,0,1.46379839637152,0.369363174230364,1.22400414746552,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,1.5905718941022,1.94653948121054,0.472674085820339,2.66075276955077,1.31752178539689,0.0654895377488563,0.728590576585084,0.370784442784429,0,0,0,0,0,0,1.19257444420023,0.860234595106124,3.47140501607594,1.69592382577203,1.67799774483962,1.92582629358047,2.29894463190492,2.58416759169329,2.13459757612026,2.34304428935269,0.805658634218294,0,0.488124115096339,2.94130464276695,4.0507097394088,1.25019619597712,2.46982309888787,1.12611480483322,0,3.79706263827252,1.83201743930407,0,0,0.436094052142534,1.49091585508596,0.633152558322899,0.529636723252875,3.15520282823695,0.709336764396714,0.560677600142307,2.1349799145941,0.74000264525148,0,0.67355336034844,0.326923806226917,0.605429710579726,1.15235184896,0.468642863667593,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.561803226808994,0,0.368502951935304,0.309977343527296,3.56400857184616,0.989067717114227,0,0.718618141816238,1.0100166837244,0,0.277064115484183,0.877955241761676,0.919463387397059,2.40380894250555,0.794025282120147,1.07633781413317,0.213557388818567,0,1.20036438433761,0.103052529238439,0.515281080091258,0.37223371266318,0.675105328965065,0.389748020644795,1.51460264546469,0.736399189138395,0.969876340912871,1.77504796258307,0.10075209822764,0,1.93260853163297,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,0,3.21620469096443,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,1.1240175325762,0,0.648119116109707,0.325808305310325,0,0,0.115930404975077,1.29149563659404,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0.93733833986777,1.34385702559088,0.992425680696705,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.672786506072164,0,0.36669142910475,2.45616259939778,0,0,0.797814349754612,0,0.514414748524284,0,0.532844358032199,0.428933980974443,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0,0,0.702848489956279,2.10662269809403,0,1.03473071292505,1.32845119707087,0.553107505625109,0.260650843404249,3.13281851940385,0.343143423810856,0,0,0,0,0,0,0.992431231275107,0.767309866440312,1.96462066103151,1.02511319404561,0.511707249066704,0.64341568457443,1.48418066444991,1.54209693802656,1.06537035187876,1.06765302817952,2.59627214591811,1.04589340613963,0.120859449591622,1.80455823272956,0,0.114814448164607,0,0,0.451199612907412,0.231046011313244,0,0,0.949964660035881,1.13733384070897,1.36074964221213,0.431831832204279,3.08454505380579,0.812839312631559,2.00675909541941,0.254876273045038,0,0.895499018888713,0,0,0,0.328014645699706,0,0,0,0,0,0.650060246036521,0,1.25671933779759,0,0,0,0.322260734604821,0,0.0852266274161009,1.15741646340759,1.4875642382488,1.72971060628596,0.893288987462089,0.4046311234222,0,0.31481234683064,0,0.924100740528266,0,0.869932992075073,1.48259375283136,0,0.744316738719335,0,0,0.767693373934002,0,0.636406495851874,0,0.179872457583315,0.54907405947211,0,0.404364963146632,0,1.68503382495592,0,0.974853958525138,1.05650146756755,0.682499557039929,0.141405431953713,1.13008116620243,1.10273068709225,0.66343897524122,1.31535265576129,0,0,2.63783490051515,0.30982349809975,1.40847801266121,0,0.294747123039363,2.49669736036875,1.06428319221179,0.211107635297664,0.658589785919804,0,0,0.0962221127255121,0,0,0,4.3050537267123,3.36942951335251,1.7737206141467,5.97280840538095,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,2.65861549082874,0.330991955875499,0.313932918407225,0,0,0,0,0,0.261177619741208,0.34945333648406,0,0,0,0,0.387956065953678,0,0,0,0,0,0.195551382734803,0.240476460754601,0.426905989478705,0.39961921916426,0,0,0,0.288109595976299,0.49701014226173,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,1.11712960508902,0.458320848023367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| ||
|short_description=p21@LTBP2 | |short_description=p21@LTBP2 | ||
}} | }} |
Latest revision as of 01:27, 16 September 2015
Short description: | p21@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 12bp_to_ENST00000556359_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V254 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.52e-19 | 24 |
endothelial cell | 1.83e-18 | 36 |
blood vessel endothelial cell | 3.27e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.27e-17 | 18 |
endothelial cell of artery | 1.75e-14 | 9 |
meso-epithelial cell | 1.28e-13 | 45 |
mesodermal cell | 1.30e-13 | 121 |
lining cell | 1.37e-10 | 58 |
barrier cell | 1.37e-10 | 58 |
transitional epithelial cell | 7.96e-10 | 4 |
urothelial cell | 7.96e-10 | 4 |
aortic endothelial cell | 3.71e-09 | 6 |
preadipocyte | 6.15e-09 | 12 |
vein endothelial cell | 1.44e-08 | 6 |
embryonic cell | 6.40e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
vasculature | 7.00e-21 | 78 |
vascular system | 7.00e-21 | 78 |
vessel | 1.91e-20 | 68 |
epithelial tube open at both ends | 2.15e-19 | 59 |
blood vessel | 2.15e-19 | 59 |
blood vasculature | 2.15e-19 | 59 |
vascular cord | 2.15e-19 | 59 |
blood vessel endothelium | 3.27e-17 | 18 |
endothelium | 3.27e-17 | 18 |
cardiovascular system endothelium | 3.27e-17 | 18 |
artery | 7.30e-16 | 42 |
arterial blood vessel | 7.30e-16 | 42 |
arterial system | 7.30e-16 | 42 |
cardiovascular system | 1.80e-15 | 109 |
splanchnic layer of lateral plate mesoderm | 4.35e-15 | 83 |
circulatory system | 8.76e-15 | 112 |
endothelial tube | 1.75e-14 | 9 |
arterial system endothelium | 1.75e-14 | 9 |
endothelium of artery | 1.75e-14 | 9 |
simple squamous epithelium | 1.89e-13 | 22 |
epithelial tube | 1.15e-12 | 117 |
squamous epithelium | 1.98e-11 | 25 |
systemic artery | 1.04e-08 | 33 |
systemic arterial system | 1.04e-08 | 33 |
urothelium | 8.08e-08 | 5 |
umbilical blood vessel | 1.01e-07 | 9 |
unilaminar epithelium | 2.55e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.74e-08 | 14 |