FFCP PHASE1:Hg19::chr11:2398533..2398551,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2398533..2398551,+
|short_description=p1@CD81
|description=CAGE_peak_1_at_CD81_5end
|association_with_transcript=0bp_to_NM_004356,uc001lwf.1_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=975 | |EntrezGene=975 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1701 | |HGNC=1701 | ||
|TSSclassifier=strong | |||
|UniProt=P60033 | |UniProt=P60033 | ||
|association_with_transcript=0bp_to_NM_004356,uc001lwf.1_5end | |||
|cluster_id=chr11:2398533..2398551,+ | |||
|description=CAGE_peak_1_at_CD81_5end | |||
|id=chr11:2398533..2398551,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-19!180;CL:0000222!1.67e-14!119;CL:0000183!3.40e-11!59;CL:0000057!7.39e-11!75;CL:0000680!4.92e-10!57;CL:0000056!4.92e-10!57;CL:0000355!4.92e-10!57;CL:0000187!1.79e-09!54;CL:0000220!5.76e-09!246;CL:0002321!7.24e-09!248;CL:0000192!7.52e-09!42;CL:0000514!7.52e-09!42;CL:0000136!1.57e-08!15;CL:0000393!3.43e-08!60;CL:0000211!3.43e-08!60;CL:0000325!1.81e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.23e-07;13!CL:0000192;2.88e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.16e-15,121;CL:0000057,3.67e-11,76;CL:0000680,1.63e-10,58;CL:0000056,1.63e-10,58;CL:0000355,1.63e-10,58;CL:0000187,5.94e-10,55;CL:0000192,2.37e-09,43;CL:0000514,2.37e-09,43;CL:0002321,2.76e-09,250;CL:0000393,1.26e-08,61;CL:0000211,1.26e-08,61;CL:0000136,1.57e-08,15;CL:0000115,9.62e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;2.88e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.20e-14!365;UBERON:0005256!1.91e-13!143;UBERON:0004872!2.32e-13!84;UBERON:0000477!3.47e-12!286;UBERON:0003914!3.53e-12!118;UBERON:0000468!6.16e-12!659;UBERON:0002049!8.62e-12!79;UBERON:0007798!8.62e-12!79;UBERON:0004111!8.89e-12!241;UBERON:0000914!1.25e-11!83;UBERON:0002329!1.25e-11!83;UBERON:0003077!1.25e-11!83;UBERON:0003059!1.25e-11!83;UBERON:0007282!1.25e-11!83;UBERON:0009618!1.25e-11!83;UBERON:0007285!1.25e-11!83;UBERON:0000483!1.84e-11!309;UBERON:0000119!2.35e-11!312;UBERON:0000055!2.55e-11!69;UBERON:0001981!1.15e-10!60;UBERON:0007500!1.15e-10!60;UBERON:0004537!1.15e-10!60;UBERON:0006965!1.15e-10!60;UBERON:0004290!2.28e-10!70;UBERON:0000486!2.72e-10!82;UBERON:0002100!8.55e-10!216;UBERON:0000467!1.05e-09!625;UBERON:0000480!1.38e-09!626;UBERON:0001134!4.69e-09!61;UBERON:0002036!4.69e-09!61;UBERON:0003082!4.69e-09!61;UBERON:0002385!5.18e-09!63;UBERON:0001015!5.18e-09!63;UBERON:0000383!5.18e-09!63;UBERON:0001637!9.66e-09!42;UBERON:0003509!9.66e-09!42;UBERON:0004572!9.66e-09!42;UBERON:0000025!9.95e-09!194;UBERON:0000481!4.72e-08!347;UBERON:0001009!4.94e-08!113;UBERON:0004535!1.13e-07!110;UBERON:0003102!1.26e-07!95;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33;UBERON:0003103!1.54e-07!69;UBERON:0000490!7.29e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.23e-07;33!UBERON:0004571;4.23e-07;33!UBERON:0001637;7.60e-07;42!UBERON:0003509;7.60e-07;42!UBERON:0004572;7.60e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.82e-13,83;UBERON:0007503,6.85e-13,78;UBERON:0000483,1.12e-12,306;UBERON:0000119,1.46e-12,309;UBERON:0003104,2.08e-12,160;UBERON:0009142,2.08e-12,160;UBERON:0003914,9.20e-12,117;UBERON:0004111,1.61e-11,240;UBERON:0002049,1.75e-11,78;UBERON:0007798,1.75e-11,78;UBERON:0007524,3.55e-11,73;UBERON:0005256,4.56e-11,122;UBERON:0000055,5.23e-11,68;UBERON:0002329,7.93e-11,71;UBERON:0003059,7.93e-11,71;UBERON:0007282,7.93e-11,71;UBERON:0004290,7.93e-11,71;UBERON:0009618,7.93e-11,71;UBERON:0003077,8.28e-11,72;UBERON:0007285,8.28e-11,72;UBERON:0000486,9.95e-11,83;UBERON:0007500,2.37e-10,59;UBERON:0001981,2.37e-10,59;UBERON:0004537,2.37e-10,59;UBERON:0006965,2.37e-10,59;UBERON:0001134,1.66e-09,62;UBERON:0002036,1.66e-09,62;UBERON:0003082,1.66e-09,62;UBERON:0002385,1.85e-09,64;UBERON:0001015,1.85e-09,64;UBERON:0000383,1.85e-09,64;UBERON:0001637,9.66e-09,42;UBERON:0003509,9.66e-09,42;UBERON:0004572,9.66e-09,42;UBERON:0000490,2.64e-08,148;UBERON:0000025,3.00e-08,192;UBERON:0003102,6.40e-08,99;UBERON:0001009,8.59e-08,112;UBERON:0002100,9.73e-08,199;UBERON:0004573,1.53e-07,33;UBERON:0004571,1.53e-07,33;UBERON:0004535,1.95e-07,109;UBERON:0003103,3.81e-07,68;UBERON:0000926,5.83e-07,315;UBERON:0004120,5.83e-07,315;UBERON:0006603,5.83e-07,315 | |||
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| ||
|short_description=p1@CD81 | |||
}} | }} |
Latest revision as of 10:28, 17 September 2015
Short description: | p1@CD81 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD81_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_004356, uc001lwf.1_5end |
EntrezGene: | CD81 |
HGNC: | 1701 |
UniProt: | P60033 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.16e-15 | 121 |
fibroblast | 3.67e-11 | 76 |
muscle precursor cell | 1.63e-10 | 58 |
myoblast | 1.63e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-10 | 58 |
muscle cell | 5.94e-10 | 55 |
smooth muscle cell | 2.37e-09 | 43 |
smooth muscle myoblast | 2.37e-09 | 43 |
embryonic cell | 2.76e-09 | 250 |
electrically responsive cell | 1.26e-08 | 61 |
electrically active cell | 1.26e-08 | 61 |
fat cell | 1.57e-08 | 15 |
endothelial cell | 9.62e-07 | 36 |