FFCP PHASE1:Hg19::chr11:35251198..35251210,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:35251198..35251210,+
|short_description=p21@CD44
|description=CAGE_peak_21_at_CD44_5end
|association_with_transcript=-328bp_to_AK127622_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-328bp_to_AK127622_5end | |||
|cluster_id=chr11:35251198..35251210,+ | |||
|description=CAGE_peak_21_at_CD44_5end | |||
|id=chr11:35251198..35251210,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.62e-11!42;CL:0000860!6.90e-10!45;CL:0000839!3.50e-09!70;CL:0000766!4.36e-09!76;CL:0000219!1.44e-08!390;CL:0000723!1.50e-08!436;CL:0000048!1.55e-08!430;CL:0000557!2.26e-08!71;CL:0002194!5.36e-08!63;CL:0000576!5.36e-08!63;CL:0000040!5.36e-08!63;CL:0000559!5.36e-08!63;CL:0000134!8.62e-08!358;CL:0000034!2.02e-07!444;CL:0002320!2.23e-07!365;CL:0002371!2.58e-07!591;CL:0002009!2.67e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-10;33!CL:0002057;1.30e-10;33!CL:0000473;2.22e-09;39!CL:0000234;2.22e-09;39!CL:0000097;8.07e-08;5!CL:0002567;8.25e-08;3!CL:0002521;1.16e-07;3!CL:0000766;5.24e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.07e-11,48;CL:0000234,9.07e-11,48;CL:0000839,9.53e-11,66;CL:0000766,1.42e-10,72;CL:0000557,1.67e-10,67;CL:0000860,4.64e-10,42;CL:0002057,4.64e-10,42;CL:0000219,1.46e-08,386;CL:0000723,3.45e-08,433;CL:0000097,4.40e-08,5;CL:0002028,4.40e-08,5;CL:0000048,5.54e-08,427;CL:0000034,9.47e-08,441;CL:0002567,9.49e-08,3;CL:0002194,1.01e-07,59;CL:0000576,1.01e-07,59;CL:0000040,1.01e-07,59;CL:0000559,1.01e-07,59;CL:0002521,1.28e-07,3;CL:0000134,2.25e-07,354;CL:0002009,2.46e-07,61;CL:0002320,5.64e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.42e-08!80;UBERON:0002384!7.44e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.16e-07;3!UBERON:0002072;1.62e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-09,76;UBERON:0001474,1.44e-08,82;UBERON:0002190,1.28e-07,3;UBERON:0002072,1.33e-07,5;UBERON:0000926,1.64e-07,315;UBERON:0004120,1.64e-07,315;UBERON:0006603,1.64e-07,315;UBERON:0004765,2.54e-07,90;UBERON:0002405,6.48e-07,93;UBERON:0002384,6.57e-07,371;UBERON:0001434,7.36e-07,100 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,1.0007329835313,0,0.872338524100369,2.53299878168311,1.26343974685366,2.35067065379855,0.245733936501509,0,0,0,0.37129905888014,0,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.164201178899891,0,0,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0.447830948479849,0,0,0.872389432677388,1.13362783106643,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,0.709446689665756,2.41321976515633,0.645484683583826,0,2.82363509313907,2.45615535052061,2.24723484445085,4.59125838556354,3.85114832491312,5.11469700639233,1.31940520074686,1.19678194572979,0,1.45104619314292,0.56738522469114,2.4912889959823,1.25624332628372,0,0.868755378820466,3.02699751316684,0.368277635987565,1.58231193720442,0,0.850417199860174,0,0.336985893439485,0.750884464207532,0.803627933485401,0,0,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.411202997999018,0.668745981562712,0.32592226663359,0.473447805734733,0,0.445641827540694,0,1.10766947291811,0.541607727530031,0.25618263945135,0.130059347559878,0.328875809207352,0.552700035571697,0.289803085735052,0.444859689486181,0,1.04535523804977,0.226618685395132,0,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,2.1686349143074,0.50133791063589,1.15877215168659,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0,0,0,0,0.949265659568129,0,0,0,0,0,1.13967460498122,0.794455084879313,2.29469296599051,1.06400514659507,0,0,0.49333509683432,0.933633106199299,0.134710672069688,0,0,0,0,0.936480230490962,0.570471821544449,1.34503812496621,0,0,0,0,0,0.413303124703062,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0.423863802319124,0.600182192168805,0.824420233907511,0.257640540045629,0.558350568994769,1.18143432568886,0.487185025805993,0,0.460249493211497,3.07127507955743,1.77504796258307,1.41052937518696,0.508681776931463,1.15956511897978,0.272746120590835,1.14721838155602,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.171567810298526,2.08525542276389,0,0.301586917234893,0.185176890317059,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0.141775097242386,0.53735113621709,0,0.383382679165211,0,1.49682337822484,6.21984346622316,1.8735593944205,3.28230326908588,0.444485260045183,2.67391897890794,1.17217447210047,3.4214489204541,0.822619941626588,0.300343057843917,3.42991719156694,0.336393253036082,0,0.36669142910475,0.517086863031111,0,0,1.59562869950922,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.904318131178758,0,0.399891964728228,0,1.00451418286425,2.10833939483032,1.19812427745791,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0,0.788123040807709,0,0.77005821767849,2.03275699377971,0,0,0.502548796003046,0.637938751653163,0.749007023947182,0,3.72973962092432,0.613457458595699,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0,0,0,0,0.737476674166813,3.47534457872331,0,0,0.82707210449155,0.431428401637234,0.106727557803444,0,0,0,1.24053903909388,0,0.561320188866147,0.384417447767103,0.511707249066704,0,0,0.308419387605311,1.59805552781814,1.64254312027618,0,1.74315567689939,0.241718899183244,1.40354529212299,0.276242966807689,1.83703117063371,0.546273504020151,2.62248829918848,0.451199612907412,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,2.70678011217942,0,0.15350367472613,0.137836572484531,0.537101224341368,0,0.0852266274161009,0.178064071293475,1.32227932288782,0.768760269460425,0.382838137483752,0.30347334256665,0,2.51849877464512,0,0.616067160352178,0.532306030317022,0,0.55597265731176,0.572499546967965,0,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.539617372749944,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,1.70599442741899,0,3.54899769660763,1.97967604735198,0,0,2.65375590096488,1.75380354101505,0,1.31178950409327,0.202910376962704,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0,4.22215270595328,0.987884678879706,0.379473173765715,0,0.384888450902048,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0.19538809540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| ||
|short_description=p21@CD44 | |||
}} | }} |
Latest revision as of 19:46, 17 September 2015
Short description: | p21@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CD44_5end |
Coexpression cluster: | NA |
Association with transcript: | -328bp_to_AK127622_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.07e-11 | 48 |
phagocyte | 9.07e-11 | 48 |
myeloid lineage restricted progenitor cell | 9.53e-11 | 66 |
myeloid leukocyte | 1.42e-10 | 72 |
granulocyte monocyte progenitor cell | 1.67e-10 | 67 |
classical monocyte | 4.64e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.64e-10 | 42 |
motile cell | 1.46e-08 | 386 |
somatic stem cell | 3.45e-08 | 433 |
mast cell | 4.40e-08 | 5 |
basophil mast progenitor cell | 4.40e-08 | 5 |
multi fate stem cell | 5.54e-08 | 427 |
stem cell | 9.47e-08 | 441 |
light melanocyte | 9.49e-08 | 3 |
monopoietic cell | 1.01e-07 | 59 |
monocyte | 1.01e-07 | 59 |
monoblast | 1.01e-07 | 59 |
promonocyte | 1.01e-07 | 59 |
subcutaneous fat cell | 1.28e-07 | 3 |
mesenchymal cell | 2.25e-07 | 354 |
macrophage dendritic cell progenitor | 2.46e-07 | 61 |
connective tissue cell | 5.64e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-09 | 76 |
bone element | 1.44e-08 | 82 |
subcutaneous adipose tissue | 1.28e-07 | 3 |
hypodermis | 1.33e-07 | 5 |
mesoderm | 1.64e-07 | 315 |
mesoderm-derived structure | 1.64e-07 | 315 |
presumptive mesoderm | 1.64e-07 | 315 |
skeletal element | 2.54e-07 | 90 |
immune system | 6.48e-07 | 93 |
connective tissue | 6.57e-07 | 371 |
skeletal system | 7.36e-07 | 100 |