FFCP PHASE1:Hg19::chr1:161015752..161015778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7391 | |EntrezGene=7391 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12593 | |HGNC=12593 | ||
|TSSclassifier=strong | |||
|UniProt=P22415,Q7Z5Y1,E9PJ52 | |UniProt=P22415,Q7Z5Y1,E9PJ52 | ||
|association_with_transcript=0bp_to_ENST00000368021,ENST00000435396,ENST00000473969,NM_007122,NM_207005,uc001fxi.2,uc001fxj.2_5end | |association_with_transcript=0bp_to_ENST00000368021,ENST00000435396,ENST00000473969,NM_007122,NM_207005,uc001fxi.2,uc001fxj.2_5end | ||
|cluster_id=chr1:161015752..161015778,- | |||
|description=CAGE_peak_2_at_USF1_5end | |description=CAGE_peak_2_at_USF1_5end | ||
|id=chr1:161015752..161015778,- | |id=chr1:161015752..161015778,- | ||
|ontology_enrichment_celltype=CL:0000738!1.70e-21!140;CL:0002087!2.24e-18!119;CL:0000037!5.23e-18!172;CL:0000566!5.23e-18!172;CL:0002031!3.88e-17!124;CL:0002032!3.59e-16!165;CL:0000837!3.59e-16!165;CL:0000988!5.97e-16!182;CL:0000542!2.74e-10!53;CL:0000051!2.74e-10!53;CL:0000838!6.86e-10!52;CL:0000766!7.60e-10!76;CL:0000236!8.12e-09!14;CL:0002009!3.43e-08!65;CL:0002194!8.48e-08!63;CL:0000576!8.48e-08!63;CL:0000040!8.48e-08!63;CL:0000559!8.48e-08!63;CL:0000839!9.33e-08!70;CL:0000557!2.38e-07!71;CL:0000763!2.48e-07!112;CL:0000049!2.48e-07!112;CL:0002393!7.55e-07!9;CL:0002397!7.55e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.70e-21!140;CL:0002087!2.24e-18!119;CL:0000037!5.23e-18!172;CL:0000566!5.23e-18!172;CL:0002031!3.88e-17!124;CL:0002032!3.59e-16!165;CL:0000837!3.59e-16!165;CL:0000988!5.97e-16!182;CL:0000542!2.74e-10!53;CL:0000051!2.74e-10!53;CL:0000838!6.86e-10!52;CL:0000766!7.60e-10!76;CL:0000236!8.12e-09!14;CL:0002009!3.43e-08!65;CL:0002194!8.48e-08!63;CL:0000576!8.48e-08!63;CL:0000040!8.48e-08!63;CL:0000559!8.48e-08!63;CL:0000839!9.33e-08!70;CL:0000557!2.38e-07!71;CL:0000763!2.48e-07!112;CL:0000049!2.48e-07!112;CL:0002393!7.55e-07!9;CL:0002397!7.55e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.16e-09;13!CL:0000542;9.82e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.56e-22,136;CL:0002087,4.53e-19,115;CL:0000037,1.78e-18,168;CL:0002031,9.22e-18,120;CL:0002032,1.29e-16,161;CL:0000837,1.29e-16,161;CL:0000988,2.68e-16,177;CL:0000766,1.96e-10,72;CL:0000542,2.74e-10,53;CL:0000051,2.74e-10,53;CL:0000838,6.86e-10,52;CL:0000236,8.12e-09,14;CL:0002009,9.27e-09,61;CL:0002194,2.36e-08,59;CL:0000576,2.36e-08,59;CL:0000040,2.36e-08,59;CL:0000559,2.36e-08,59;CL:0000839,2.94e-08,66;CL:0000557,8.12e-08,67;CL:0000763,1.22e-07,108;CL:0000049,1.22e-07,108;CL:0002393,7.55e-07,9;CL:0002397,7.55e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;9.82e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.66e-13!115;UBERON:0002390!3.15e-09!102;UBERON:0003061!3.15e-09!102;UBERON:0002193!1.52e-08!112;UBERON:0001049!7.68e-08!57;UBERON:0005068!7.68e-08!57;UBERON:0006241!7.68e-08!57;UBERON:0007135!7.68e-08!57;UBERON:0001017!3.79e-07!82;UBERON:0002020!5.06e-07!34;UBERON:0003528!5.06e-07!34;UBERON:0005743!5.16e-07!86;UBERON:0001893!5.88e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.79e-12,114;UBERON:0002390,1.20e-09,98;UBERON:0003061,1.20e-09,98;UBERON:0002193,6.70e-09,108;UBERON:0001049,1.11e-07,56;UBERON:0005068,1.11e-07,56;UBERON:0006241,1.11e-07,56;UBERON:0007135,1.11e-07,56;UBERON:0000073,1.32e-07,53;UBERON:0002616,1.32e-07,53;UBERON:0003528,5.06e-07,34;UBERON:0002020,5.06e-07,34;UBERON:0001017,5.31e-07,81;UBERON:0001893,5.88e-07,34 | |||
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| ||
|short_description=p2@USF1 | |short_description=p2@USF1 | ||
}} | }} |
Latest revision as of 04:16, 18 September 2015
Short description: | p2@USF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368021, ENST00000435396, ENST00000473969, NM_007122, NM_207005, uc001fxi.2, uc001fxj.2_5end |
EntrezGene: | USF1 |
HGNC: | 12593 |
UniProt: | P22415Q7Z5Y1E9PJ52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.56e-22 | 136 |
nongranular leukocyte | 4.53e-19 | 115 |
hematopoietic stem cell | 1.78e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 9.22e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.29e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-16 | 161 |
hematopoietic cell | 2.68e-16 | 177 |
myeloid leukocyte | 1.96e-10 | 72 |
lymphocyte | 2.74e-10 | 53 |
common lymphoid progenitor | 2.74e-10 | 53 |
lymphoid lineage restricted progenitor cell | 6.86e-10 | 52 |
B cell | 8.12e-09 | 14 |
macrophage dendritic cell progenitor | 9.27e-09 | 61 |
monopoietic cell | 2.36e-08 | 59 |
monocyte | 2.36e-08 | 59 |
monoblast | 2.36e-08 | 59 |
promonocyte | 2.36e-08 | 59 |
myeloid lineage restricted progenitor cell | 2.94e-08 | 66 |
granulocyte monocyte progenitor cell | 8.12e-08 | 67 |
myeloid cell | 1.22e-07 | 108 |
common myeloid progenitor | 1.22e-07 | 108 |
intermediate monocyte | 7.55e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.79e-12 | 114 |
hematopoietic system | 1.20e-09 | 98 |
blood island | 1.20e-09 | 98 |
hemolymphoid system | 6.70e-09 | 108 |
neural tube | 1.11e-07 | 56 |
neural rod | 1.11e-07 | 56 |
future spinal cord | 1.11e-07 | 56 |
neural keel | 1.11e-07 | 56 |
regional part of nervous system | 1.32e-07 | 53 |
regional part of brain | 1.32e-07 | 53 |
brain grey matter | 5.06e-07 | 34 |
gray matter | 5.06e-07 | 34 |
central nervous system | 5.31e-07 | 81 |
telencephalon | 5.88e-07 | 34 |