FFCP PHASE1:Hg19::chr1:186275717..186275734,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186275717..186275734,+ | |||
|coexpression_cluster_id=C287 | |||
|description=CAGE_peak_at_chr1:186275717..186275734,+ | |description=CAGE_peak_at_chr1:186275717..186275734,+ | ||
|id=chr1:186275717..186275734,+ | |id=chr1:186275717..186275734,+ | ||
|ontology_enrichment_celltype=CL:0000153!7.89e-25!9;CL:0000447!7.89e-25!9;CL:0000667!5.57e-20!6;CL:0000058!5.57e-20!6;CL:0000138!5.57e-20!6;CL:0000327!1.26e-15!14;CL:0000499!1.85e-15!27;CL:0000135!1.46e-14!3;CL:0000386!1.46e-14!3;CL:0000388!1.46e-14!3;CL:0000214!6.93e-07!3 | |ontology_enrichment_celltype=CL:0000153!7.89e-25!9;CL:0000447!7.89e-25!9;CL:0000667!5.57e-20!6;CL:0000058!5.57e-20!6;CL:0000138!5.57e-20!6;CL:0000327!1.26e-15!14;CL:0000499!1.85e-15!27;CL:0000135!1.46e-14!3;CL:0000386!1.46e-14!3;CL:0000388!1.46e-14!3;CL:0000214!6.93e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002591;4.28e-19;1!CL:0000182;2.35e-14;12!CL:0000138;3.44e-13;6!CL:0000153;4.17e-09;9!CL:0000447;4.17e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,5.62e-19,1;CL:0000182,2.40e-14,12;CL:0000058,3.34e-13,6;CL:0000138,3.34e-13,6;CL:0000153,4.09e-09,9;CL:0000447,4.09e-09,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!1.46e-14!3;UBERON:0001630!1.04e-10!2;UBERON:0005090!1.04e-10!2;UBERON:0007023!1.14e-07!115;UBERON:0003351!3.16e-07!6;UBERON:0006915!6.93e-07!3;UBERON:0002018!6.93e-07!3;UBERON:0002217!6.93e-07!3;UBERON:0007616!6.93e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;4.28e-19;1!UBERON:0000026;4.28e-19;1!UBERON:0008784;4.28e-19;1!UBERON:0006058;4.28e-19;1!UBERON:0003663;4.28e-19;1!UBERON:0004256;4.28e-19;1!UBERON:0004708;4.28e-19;1!UBERON:0002101;4.28e-19;1!UBERON:0004709;4.28e-19;1!UBERON:0002529;4.28e-19;1!UBERON:0010538;4.28e-19;1!UBERON:0003661;4.28e-19;1!UBERON:0010890;4.28e-19;1!UBERON:0002471;4.28e-19;1!UBERON:0001383;4.28e-19;1!UBERON:0010758;4.28e-19;1!UBERON:0010707;4.28e-19;1!UBERON:0000978;4.28e-19;1!UBERON:0002103;4.28e-19;1!UBERON:0001665;4.28e-19;1!UBERON:0003823;4.28e-19;1!UBERON:0000154;4.28e-19;1!UBERON:0010709;4.28e-19;1!UBERON:0002107;1.08e-15;19!UBERON:0006925;1.08e-15;19!UBERON:0002423;5.15e-12;25!UBERON:0005090;3.13e-10;2!UBERON:0001630;3.13e-10;2!UBERON:0000078;3.13e-10;2!UBERON:0002012;3.13e-10;2!UBERON:0008886;3.13e-10;2!UBERON:0002365;4.57e-10;31!UBERON:0002330;4.57e-10;31!UBERON:0002368;3.43e-08;33!UBERON:0000949;6.16e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.69e-19,1;UBERON:0001389,4.69e-19,1;UBERON:0000026,4.69e-19,1;UBERON:0008784,4.69e-19,1;UBERON:0006058,4.69e-19,1;UBERON:0003663,4.69e-19,1;UBERON:0004256,4.69e-19,1;UBERON:0004708,4.69e-19,1;UBERON:0002101,4.69e-19,1;UBERON:0004709,4.69e-19,1;UBERON:0002529,4.69e-19,1;UBERON:0010538,4.69e-19,1;UBERON:0003661,4.69e-19,1;UBERON:0010890,4.69e-19,1;UBERON:0002471,4.69e-19,1;UBERON:0001383,4.69e-19,1;UBERON:0004357,4.69e-19,1;UBERON:0004347,4.69e-19,1;UBERON:0005420,4.69e-19,1;UBERON:0005732,4.69e-19,1;UBERON:0010758,4.69e-19,1;UBERON:0010707,4.69e-19,1;UBERON:0000978,4.69e-19,1;UBERON:0002103,4.69e-19,1;UBERON:0001665,4.69e-19,1;UBERON:0003823,4.69e-19,1;UBERON:0000154,4.69e-19,1;UBERON:0010709,4.69e-19,1;UBERON:0005733,4.69e-19,1;UBERON:0005730,4.69e-19,1;UBERON:0002107,1.11e-15,19;UBERON:0006925,1.11e-15,19;UBERON:0008836,1.11e-15,19;UBERON:0008835,1.35e-13,22;UBERON:0003894,1.35e-13,22;UBERON:0009854,5.07e-13,23;UBERON:0007499,5.23e-12,25;UBERON:0009497,5.23e-12,25;UBERON:0000015,5.23e-12,25;UBERON:0002423,5.23e-12,25;UBERON:0006235,5.23e-12,25;UBERON:0004161,5.23e-12,25;UBERON:0009856,1.47e-11,26;UBERON:0005090,3.27e-10,2;UBERON:0001630,3.27e-10,2;UBERON:0000078,3.58e-10,2;UBERON:0007497,3.58e-10,2;UBERON:0003643,3.58e-10,2;UBERON:0003504,3.58e-10,2;UBERON:0003469,3.58e-10,2;UBERON:0003496,3.58e-10,2;UBERON:0002012,3.58e-10,2;UBERON:0008886,3.58e-10,2;UBERON:0007303,3.58e-10,2;UBERON:0002061,3.58e-10,2;UBERON:0005432,3.58e-10,2;UBERON:0004363,3.58e-10,2;UBERON:0002365,9.55e-10,31;UBERON:0002330,9.55e-10,31;UBERON:0002368,1.15e-08,35;UBERON:0003929,1.83e-08,54;UBERON:0004145,3.35e-07,3;UBERON:0000949,8.51e-07,45 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.724232594804119,7.95285947051099,8.75942766544745,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,7.86261773342101,6.49868897349544,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81035807563014,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.410651227424988,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.724232594804119,7.95285947051099,8.75942766544745,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,7.86261773342101,6.49868897349544,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81035807563014,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.410651227424988,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr1:186275717..186275734,+ | |short_description=p@chr1:186275717..186275734,+ | ||
}} | }} |
Latest revision as of 01:29, 28 July 2015
Short description: | p@chr1:186275717..186275734, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186275717..186275734, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 5.62e-19 | 1 |
hepatocyte | 2.40e-14 | 12 |
chondroblast | 3.34e-13 | 6 |
chondrocyte | 3.34e-13 | 6 |
GAG secreting cell | 4.09e-09 | 9 |
carbohydrate secreting cell | 4.09e-09 | 9 |