FFCP PHASE1:Hg19::chr1:190445111..190445122,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339479 | |EntrezGene=339479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22393 | |HGNC=22393 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z260 | |UniProt=B7Z260 | ||
|association_with_transcript=-169bp_to_ENST00000534846,uc010pot.1_5end | |association_with_transcript=-169bp_to_ENST00000534846,uc010pot.1_5end | ||
|cluster_id=chr1:190445111..190445122,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_15_at_FAM5C_5end | |description=CAGE_peak_15_at_FAM5C_5end | ||
|id=chr1:190445111..190445122,- | |id=chr1:190445111..190445122,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.79e-88;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0002037;1.09e-44;6!UBERON:0002148;5.96e-34;2!UBERON:0006331;5.96e-34;2!UBERON:0009662;5.96e-34;2!UBERON:0000988;3.66e-23;3!UBERON:0002298;2.59e-12;6!UBERON:0000125;1.16e-08;9!UBERON:0002308;1.16e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0002148,7.05e-34,2;UBERON:0006331,7.05e-34,2;UBERON:0009662,7.05e-34,2;UBERON:0000988,4.09e-23,3;UBERON:0002298,2.74e-12,6;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0000125,1.21e-08,9;UBERON:0002308,1.21e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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| ||
|short_description=p15@FAM5C | |short_description=p15@FAM5C | ||
}} | }} |
Latest revision as of 09:14, 19 September 2015
Short description: | p15@FAM5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_FAM5C_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -169bp_to_ENST00000534846, uc010pot.1_5end |
EntrezGene: | FAM5C |
HGNC: | 22393 |
UniProt: | B7Z260 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
locus ceruleus | 7.05e-34 | 2 |
brainstem nucleus | 7.05e-34 | 2 |
hindbrain nucleus | 7.05e-34 | 2 |
pons | 4.09e-23 | 3 |
brainstem | 2.74e-12 | 6 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
neural nucleus | 1.21e-08 | 9 |
nucleus of brain | 1.21e-08 | 9 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |