FFCP PHASE1:Hg19::chr1:207226437..207226466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55432 | |EntrezGene=55432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25035 | |HGNC=25035 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VVQ6 | |UniProt=Q5VVQ6 | ||
|association_with_transcript=-112bp_to_ENST00000367084,uc001hff.1_5end | |association_with_transcript=-112bp_to_ENST00000367084,uc001hff.1_5end | ||
|cluster_id=chr1:207226437..207226466,- | |||
|description=CAGE_peak_3_at_YOD1_5end | |description=CAGE_peak_3_at_YOD1_5end | ||
|id=chr1:207226437..207226466,- | |id=chr1:207226437..207226466,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;8.25e-09;3!CL:0000764;4.34e-07;2!CL:0000558;4.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.41e-09,3;CL:0000764,4.08e-07,2;CL:0000765,4.08e-07,2;CL:0000050,4.08e-07,2;CL:0000038,4.08e-07,2;CL:0000558,4.08e-07,2;CL:0000547,4.08e-07,2;CL:0000549,4.08e-07,2;CL:0000550,4.08e-07,2;CL:0000552,4.08e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.07e-14!106;DOID:0050687!1.06e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-11!115;UBERON:0001004!2.73e-07!72;UBERON:0000065!7.74e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.30e-14;15!UBERON:0000179;8.30e-14;15!UBERON:0000463;8.30e-14;15!UBERON:0002390;5.33e-09;32!UBERON:0002370;3.86e-07;2!UBERON:0005058;3.86e-07;2!UBERON:0009113;3.86e-07;2!UBERON:0001737;4.99e-07;9!UBERON:0001557;4.99e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.63e-14,15;UBERON:0000179,8.63e-14,15;UBERON:0000463,8.63e-14,15;UBERON:0001557,6.11e-08,19;UBERON:0001737,3.67e-07,9 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.534893840235659,0.164201178899891,0.314843125254717,0.393364276848904,0,0.77408061658038,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0.727752183563449,0,0,0.929119112685311,0,0,0.945928919554341,1.03423704220986,0.645484683583826,2.70852973188684,0.564727018627814,0,0.449446968890169,0.306083892370903,0.320929027076094,1.27867425159808,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,0,0,0.75374599577023,0.521482918420201,2.38907729175628,0.605399502633369,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0.560508562981536,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.444859689486181,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.130979075497713,0.364295288292542,0.370784442784429,0.324547393654683,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,3.9534125230819,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0.386521706326594,0.818238361772504,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,1.77460200059766,0.842923450390509,1.44606617930089,0.772057809126758,1.52515610864684,0.71181185733329,1.07865046528132,1.56977172100277,0,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0.171567810298526,0.329250856225877,0,0.502644862058154,0.462942225792648,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,1.47798971368783,0.704387472105808,1.65862492432618,0,1.2624243342638,0.126995788584338,1.52795370223311,2.34434894420094,1.71072446022705,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,1.06375246633948,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,1.07813787429759,0.256686072559497,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0.213455115606889,1.81876542867756,0,0.907170879989041,0.496215615637554,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.362578348774867,0.200506470303285,0.736647911487171,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,3.72741790298089,2.61435451024901,0,0.328014645699706,0.325378394664303,0.309123034943167,0.0915694648183434,0.165018999841176,0.574265537996172,0.650060246036521,0,0,0,0,0.275673144969061,0.107420244868274,0,0.255679882248303,0.0890320356467374,0.330569830721956,0.192190067365106,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0,0,3.55213326462519,2.29391162142713,1.13929437434833,2.62054953003568,1.64544909234478,1.94541993357815,1.08006287447623,4.75875105776562,0,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.187403738543,0,3.78637949866376,0.33307196799782,0,1.12284324244932,0,0.121360521749513,0,0,1.90995587790152,0,2.15012491469462,0,1.26602474769461,0.222617410045812,0,1.05562704063997,0.19924798825107,0,0,0.20453736500431,0.492339221844278,0,1.97710372524119,1.25314822272926,0.511572370226872,0.295930216910801,4.7896618469388,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0.254253650292766,0.236387681767936,0,0,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0.653630781113941,1.67308493134324,0.230850775511391,0.227884111694002,0,0.269272933229316,0.108647371922008,2.23300811812344,0.183195186803725,0,0,0,1.32969345520125,1.57916962432026,2.35275041181287,2.68514539161348,0.75901493089674,0.794682894901893,0.632994193584081,1.30586246527318,0.282706142867882,0.216388639742091,0.995261931078505,0.265372693510018,0,0,0,0,1.14581926067151,0.802577647298789,0.468528891450678,0,1.17398771359254,0.242780379534093,0,0,0,0.126373159256976,1.9542044523884,0.414752765588989,0,0,0,1.19472429772959,0,0,0.867798691675654,2.74378712760257,1.3929473052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| ||
|short_description=p3@YOD1 | |short_description=p3@YOD1 | ||
}} | }} |
Latest revision as of 07:01, 20 September 2015
Short description: | p3@YOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YOD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -112bp_to_ENST00000367084, uc001hff.1_5end |
EntrezGene: | YOD1 |
HGNC: | 25035 |
UniProt: | Q5VVQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.41e-09 | 3 |
erythroid lineage cell | 4.08e-07 | 2 |
erythroblast | 4.08e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.08e-07 | 2 |
erythroid progenitor cell | 4.08e-07 | 2 |
reticulocyte | 4.08e-07 | 2 |
proerythroblast | 4.08e-07 | 2 |
basophilic erythroblast | 4.08e-07 | 2 |
polychromatophilic erythroblast | 4.08e-07 | 2 |
orthochromatic erythroblast | 4.08e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.63e-14 | 15 |
haemolymphatic fluid | 8.63e-14 | 15 |
organism substance | 8.63e-14 | 15 |
upper respiratory tract | 6.11e-08 | 19 |
larynx | 3.67e-07 | 9 |