FFCP PHASE1:Hg19::chr1:237144611..237144625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=36695 | |HGNC=36695 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000450819_5end | |association_with_transcript=-13bp_to_ENST00000450819_5end | ||
|cluster_id=chr1:237144611..237144625,+ | |||
|description=CAGE_peak_1_at_RPL35P1_5end | |description=CAGE_peak_1_at_RPL35P1_5end | ||
|id=chr1:237144611..237144625,+ | |id=chr1:237144611..237144625,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.92e-09;6!CL:0000404;2.92e-09;6!CL:0000228;2.94e-07;1!CL:0002372;2.94e-07;1!CL:0002570;9.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.74e-09,6;CL:0000031,2.74e-09,6;CL:0000404,2.74e-09,6;CL:0000228,2.95e-07,1;CL:0002372,2.95e-07,1;CL:0000047,4.59e-07,8;CL:0000342,6.99e-07,1;CL:0002565,6.99e-07,1;CL:0000511,7.82e-07,1;CL:0002625,7.82e-07,1;CL:0000216,7.82e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.99e-11;29!CL:0000031;2.92e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!7.62e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.51e-37;9!UBERON:0001557;2.51e-37;9!UBERON:0000072;9.22e-08;37!UBERON:0000065;4.77e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.51e-37,9;UBERON:0001557,3.58e-17,19;UBERON:0008947,5.48e-08,38;UBERON:0003258,5.48e-08,38;UBERON:0002506,6.99e-07,1;UBERON:0001769,6.99e-07,1;UBERON:0001136,7.82e-07,1;UBERON:0001343,7.82e-07,1;UBERON:0004910,7.82e-07,1;UBERON:0005154,7.82e-07,1;UBERON:0005295,7.82e-07,1;UBERON:0004813,7.82e-07,1;UBERON:0005297,7.82e-07,1;UBERON:0005294,7.82e-07,1;UBERON:0010141,7.82e-07,1;UBERON:0005891,7.82e-07,1 | |||
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| ||
|short_description=p1@RPL35P1 | |short_description=p1@RPL35P1 | ||
}} | }} |
Latest revision as of 15:06, 16 September 2015
Short description: | p1@RPL35P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL35P1_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000450819_5end |
EntrezGene: | NA |
HGNC: | 36695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.74e-09 | 6 |
neuroblast | 2.74e-09 | 6 |
electrically signaling cell | 2.74e-09 | 6 |
multinucleate cell | 2.95e-07 | 1 |
myotube | 2.95e-07 | 1 |
neuronal stem cell | 4.59e-07 | 8 |
pigment cell (sensu Vertebrata) | 6.99e-07 | 1 |
iris pigment epithelial cell | 6.99e-07 | 1 |
androgen binding protein secreting cell | 7.82e-07 | 1 |
seminiferous tubule epithelial cell | 7.82e-07 | 1 |
Sertoli cell | 7.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.51e-37 | 9 |
upper respiratory tract | 3.58e-17 | 19 |
respiratory primordium | 5.48e-08 | 38 |
endoderm of foregut | 5.48e-08 | 38 |
iris epithelium | 6.99e-07 | 1 |
iris | 6.99e-07 | 1 |
mesothelium | 7.82e-07 | 1 |
seminiferous tubule of testis | 7.82e-07 | 1 |
epithelium of male gonad | 7.82e-07 | 1 |
epithelial cord | 7.82e-07 | 1 |
sex cord | 7.82e-07 | 1 |
seminiferous tubule epithelium | 7.82e-07 | 1 |
testis sex cord | 7.82e-07 | 1 |
genital ridge | 7.82e-07 | 1 |
primitive sex cord of indifferent gonad | 7.82e-07 | 1 |
coelomic epithelium | 7.82e-07 | 1 |