FFCP PHASE1:Hg19::chr11:63340284..63340291,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:63340284..63340291,+
|short_description=p@chr11:63340284..63340291,+
|description=CAGE_peak_at_chr11:63340284..63340291,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:63340284..63340291,+ | |||
|description=CAGE_peak_at_chr11:63340284..63340291,+ | |||
|id=chr11:63340284..63340291,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;6.20e-25;3!CL:0002097;2.37e-10;2!CL:1000415;2.37e-10;2!CL:0000174;2.55e-07;3!CL:0000322;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,8.95e-25,3;CL:1000415,1.89e-10,2;CL:0002097,2.27e-10,2;CL:0000322,2.05e-07,3;CL:0000174,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.81e-07;3!UBERON:0003057;1.81e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!1.42e-10!143;DOID:162!1.96e-10!235;DOID:14566!2.55e-10!239;DOID:305!1.70e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.47e-19;1!DOID:0060061;2.47e-19;1!DOID:8691;2.47e-19;1!DOID:170;5.42e-13;6!DOID:3910;2.37e-10;2!DOID:4929;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.71e-19,1;DOID:0060061,2.71e-19,1;DOID:8691,2.71e-19,1;DOID:170,4.01e-13,6;DOID:4929,1.57e-10,2;DOID:3910,1.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000060!1.85e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.42e-13;6!UBERON:0002358;5.42e-13;6!UBERON:0003684;5.42e-13;6!UBERON:0001178;5.42e-13;6!UBERON:0006562;2.37e-10;2!UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0004457;5.63e-09;9!UBERON:0000042;5.63e-09;9!UBERON:0002240;1.81e-07;3!UBERON:0005174;1.81e-07;3!UBERON:0001137;1.81e-07;3!UBERON:0002369;2.55e-07;3!UBERON:0002110;2.55e-07;3!UBERON:0004821;2.55e-07;3!UBERON:0001235;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0006858;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.50e-13,6;UBERON:0002358,6.50e-13,6;UBERON:0003684,6.50e-13,6;UBERON:0001178,6.50e-13,6;UBERON:0004903,1.72e-10,2;UBERON:0002173,1.72e-10,2;UBERON:0002186,1.72e-10,2;UBERON:0002240,1.82e-07,3;UBERON:0005174,1.82e-07,3;UBERON:0001137,1.82e-07,3;UBERON:0004821,2.05e-07,3;UBERON:0003215,2.05e-07,3;UBERON:0010368,2.05e-07,3;UBERON:0009911,2.05e-07,3;UBERON:0002299,2.05e-07,3;UBERON:0006524,2.05e-07,3;UBERON:0008874,2.05e-07,3;UBERON:0002169,2.05e-07,3;UBERON:0004894,2.05e-07,3;UBERON:0002110,2.19e-07,3;UBERON:0006242,2.19e-07,3;UBERON:0002369,2.47e-07,3;UBERON:0001235,2.47e-07,3;UBERON:0006858,2.47e-07,3;UBERON:0004457,6.54e-07,12;UBERON:0000042,6.54e-07,12 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.85870796139317,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0.614321404198464,0,0,0.111308705022906,0.16480387422676,0,0,0,0.251932747854276,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0.260427761085233,0,0,0.1137934482855,1.77977555204936,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0.848118428603645,0,0,0,0,0.296521128680622,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,1.36885967914362,0.160317640503067,0,0.39961921916426,0,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.236417121897595,0,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,1.28664954824955,0,0,0,0,0.179088841081487,0,0.438568099157414,0.706756583783524,0,0.168942440653073,0,0.345430341731199,0.303859956177382,0,0,0.664324201566815,0.163565394255844,0.327609848846413,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.887136517302272,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,1.14986184875636,0,0,0,0,0,0,0.342976018874837,0,0,0.709163045303809,0.222462803784138,0,0,0,0,0.215927591218621,0.9555033757741,0,0,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0,0,1.14553434272025,0,0,0,0,0.121917924982269,0,0.205325613712494,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,3.8039015482506,0,0,0,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0,0,0,0,0,0.432626562123789,0.378499274505237,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0,0,0,0,0.448527450322454,0,0,0.217716747896961,0,0,0,0,0.244209805832924,0.213454691755431,0,1.79650404213174,0,0,0,0,0.201273793591026,0 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|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.85870796139317,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0.614321404198464,0,0,0.111308705022906,0.16480387422676,0,0,0,0.251932747854276,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0.260427761085233,0,0,0.1137934482855,1.77977555204936,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0.848118428603645,0,0,0,0,0.296521128680622,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,1.36885967914362,0.160317640503067,0,0.39961921916426,0,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.236417121897595,0,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,1.28664954824955,0,0,0,0,0.179088841081487,0,0.438568099157414,0.706756583783524,0,0.168942440653073,0,0.345430341731199,0.303859956177382,0,0,0.664324201566815,0.163565394255844,0.327609848846413,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.887136517302272,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,1.14986184875636,0,0,0,0,0,0,0.342976018874837,0,0,0.709163045303809,0.222462803784138,0,0,0,0,0.215927591218621,0.9555033757741,0,0,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0,0,1.14553434272025,0,0,0,0,0.121917924982269,0,0.205325613712494,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,3.8039015482506,0,0,0,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0,0,0,0,0,0.432626562123789,0.378499274505237,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0,0,0,0,0.448527450322454,0,0,0.217716747896961,0,0,0,0,0.244209805832924,0.213454691755431,0,1.79650404213174,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr11:63340284..63340291,+ | |||
}} | }} |
Latest revision as of 23:57, 23 July 2015
Short description: | p@chr11:63340284..63340291, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:63340284..63340291, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 8.95e-25 | 3 |
epithelial cell of gall bladder | 1.89e-10 | 2 |
cortical cell of adrenal gland | 2.27e-10 | 2 |
pneumocyte | 2.05e-07 | 3 |
steroid hormone secreting cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.50e-13 | 6 |
peritoneum | 6.50e-13 | 6 |
abdominal cavity | 6.50e-13 | 6 |
visceral peritoneum | 6.50e-13 | 6 |
bronchoalveolar duct junction | 1.72e-10 | 2 |
alveolar duct | 1.72e-10 | 2 |
bronchiole | 1.72e-10 | 2 |
spinal cord | 1.82e-07 | 3 |
dorsal region element | 1.82e-07 | 3 |
dorsum | 1.82e-07 | 3 |
pulmonary alveolus epithelium | 2.05e-07 | 3 |
alveolus | 2.05e-07 | 3 |
pulmonary lobule | 2.05e-07 | 3 |
lobule | 2.05e-07 | 3 |
alveolus of lung | 2.05e-07 | 3 |
alveolar system | 2.05e-07 | 3 |
pulmonary acinus | 2.05e-07 | 3 |
alveolar sac | 2.05e-07 | 3 |
alveolar wall | 2.05e-07 | 3 |
gallbladder | 2.19e-07 | 3 |
gall bladder primordium | 2.19e-07 | 3 |
adrenal gland | 2.47e-07 | 3 |
adrenal cortex | 2.47e-07 | 3 |
adrenal/interrenal gland | 2.47e-07 | 3 |
cavity lining | 6.54e-07 | 12 |
serous membrane | 6.54e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.71e-19 | 1 |
cutaneous T cell lymphoma | 2.71e-19 | 1 |
mycosis fungoides | 2.71e-19 | 1 |
endocrine gland cancer | 4.01e-13 | 6 |
tubular adenocarcinoma | 1.57e-10 | 2 |
lung adenocarcinoma | 1.72e-10 | 2 |