FFCP PHASE1:Hg19::chr11:6625084..6625095,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:6625084..6625095,+
|short_description=p3@ILK
|description=CAGE_peak_3_at_ILK_5end
|association_with_transcript=38bp_to_ENST00000396751_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3611 | |EntrezGene=3611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6040 | |HGNC=6040 | ||
|TSSclassifier=strong | |||
|UniProt=Q13418 | |UniProt=Q13418 | ||
|association_with_transcript=38bp_to_ENST00000396751_5end | |||
|cluster_id=chr11:6625084..6625095,+ | |||
|description=CAGE_peak_3_at_ILK_5end | |||
|id=chr11:6625084..6625095,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.45e-10!24;CL:0000222!9.41e-10!119;CL:0000359!1.72e-09!32;CL:0000115!1.27e-08!35;CL:0002078!4.64e-08!44;CL:0000192!5.94e-08!42;CL:0000514!5.94e-08!42;CL:0000071!2.31e-07!18;CL:0002546!2.31e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.51e-10;24!CL:0000359;3.95e-10;32!CL:0000115;3.08e-09;36!CL:0000192;1.60e-07;43!CL:0000071;2.95e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.41e-11,36;CL:0002139,1.07e-10,24;CL:0000222,1.46e-10,121;CL:0000359,3.27e-10,32;CL:0002078,5.34e-10,45;CL:0000192,3.32e-09,43;CL:0000514,3.32e-09,43;CL:0000071,2.08e-07,18;CL:0002546,2.08e-07,18;CL:1000413,7.67e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;1.60e-07;43!CL:0002546;2.95e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.92e-22!69;UBERON:0002049!7.65e-22!79;UBERON:0007798!7.65e-22!79;UBERON:0004535!7.58e-20!110;UBERON:0001009!5.72e-19!113;UBERON:0001981!6.60e-18!60;UBERON:0007500!6.60e-18!60;UBERON:0004537!6.60e-18!60;UBERON:0006965!6.60e-18!60;UBERON:0003914!8.35e-16!118;UBERON:0001637!1.33e-14!42;UBERON:0003509!1.33e-14!42;UBERON:0004572!1.33e-14!42;UBERON:0004872!1.72e-14!84;UBERON:0003081!7.04e-14!216;UBERON:0000480!1.88e-10!626;UBERON:0000467!2.89e-10!625;UBERON:0004573!3.12e-10!33;UBERON:0004571!3.12e-10!33;UBERON:0000926!3.15e-10!448;UBERON:0004120!3.15e-10!448;UBERON:0006603!3.15e-10!448;UBERON:0000468!6.19e-10!659;UBERON:0000947!5.12e-09!21;UBERON:0010191!5.12e-09!21;UBERON:0000922!6.95e-08!612;UBERON:0004111!8.71e-08!241;UBERON:0002050!2.27e-07!605;UBERON:0005423!2.27e-07!605;UBERON:0001986!2.31e-07!18;UBERON:0004638!2.31e-07!18;UBERON:0004852!2.31e-07!18;UBERON:0000477!2.87e-07!286;UBERON:0005256!3.22e-07!143;UBERON:0000923!3.32e-07!604;UBERON:0005291!3.32e-07!604;UBERON:0006598!3.32e-07!604;UBERON:0002532!3.32e-07!604;UBERON:0000119!4.92e-07!312;UBERON:0000490!6.42e-07!138;UBERON:0000025!8.66e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.28e-12;42!UBERON:0003509;5.28e-12;42!UBERON:0004572;5.28e-12;42!UBERON:0000055;1.76e-11;65!UBERON:0000947;7.68e-11;21!UBERON:0010191;7.68e-11;21!UBERON:0004573;7.97e-11;33!UBERON:0004571;7.97e-11;33!UBERON:0007500;8.15e-11;56!UBERON:0001981;8.15e-11;56!UBERON:0004537;8.15e-11;56!UBERON:0002049;1.03e-09;75!UBERON:0007798;1.03e-09;75!UBERON:0003914;1.75e-09;74!UBERON:0004638;2.95e-07;18!UBERON:0001986;2.95e-07;18!UBERON:0004852;2.95e-07;18!UBERON:0004535;4.42e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.49e-24,68;UBERON:0002049,1.21e-23,78;UBERON:0007798,1.21e-23,78;UBERON:0004535,1.71e-22,109;UBERON:0001009,6.04e-21,112;UBERON:0007500,2.25e-19,59;UBERON:0001981,2.25e-19,59;UBERON:0004537,2.25e-19,59;UBERON:0006965,2.25e-19,59;UBERON:0003914,6.01e-19,117;UBERON:0001637,1.38e-16,42;UBERON:0003509,1.38e-16,42;UBERON:0004572,1.38e-16,42;UBERON:0004872,3.71e-16,83;UBERON:0003081,4.74e-12,203;UBERON:0004573,1.99e-11,33;UBERON:0004571,1.99e-11,33;UBERON:0004111,6.94e-11,240;UBERON:0000947,1.97e-10,21;UBERON:0010191,1.97e-10,21;UBERON:0000025,1.32e-09,192;UBERON:0000926,7.58e-09,315;UBERON:0004120,7.58e-09,315;UBERON:0006603,7.58e-09,315;UBERON:0003104,1.86e-08,160;UBERON:0009142,1.86e-08,160;UBERON:0000490,8.83e-08,148;UBERON:0000119,1.30e-07,309;UBERON:0004638,2.08e-07,18;UBERON:0001986,2.08e-07,18;UBERON:0004852,2.08e-07,18;UBERON:0005256,2.80e-07,122;UBERON:0000483,3.88e-07,306;UBERON:0007503,4.71e-07,78;UBERON:0003915,7.67e-07,9;UBERON:0004700,7.67e-07,9;UBERON:0001917,7.67e-07,9 | |||
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| ||
|short_description=p3@ILK | |||
}} | }} |
Latest revision as of 14:38, 19 September 2015
Short description: | p3@ILK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ILK_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000396751_5end |
EntrezGene: | ILK |
HGNC: | 6040 |
UniProt: | Q13418 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.41e-11 | 36 |
endothelial cell of vascular tree | 1.07e-10 | 24 |
mesodermal cell | 1.46e-10 | 121 |
vascular associated smooth muscle cell | 3.27e-10 | 32 |
meso-epithelial cell | 5.34e-10 | 45 |
smooth muscle cell | 3.32e-09 | 43 |
smooth muscle myoblast | 3.32e-09 | 43 |
blood vessel endothelial cell | 2.08e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.08e-07 | 18 |
endothelial cell of artery | 7.67e-07 | 9 |