FFCP PHASE1:Hg19::chr20:5485142..5485153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149837 | |EntrezGene=149837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=88bp_to_NR_015406,uc002wmc.3_5end | |association_with_transcript=88bp_to_NR_015406,uc002wmc.3_5end | ||
|cluster_id=chr20:5485142..5485153,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_LOC149837_5end | |description=CAGE_peak_2_at_LOC149837_5end | ||
|id=chr20:5485142..5485153,- | |id=chr20:5485142..5485153,- | ||
|ontology_enrichment_celltype=CL:0000342!1.71e-08!1;CL:0002565!1.71e-08!1;CL:0002537!7.28e-07!5 | |ontology_enrichment_celltype=CL:0000342!1.71e-08!1;CL:0002565!1.71e-08!1;CL:0002537!7.28e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.11e-11!20;UBERON:0000988!1.70e-10!3;UBERON:0002619!2.27e-10!22;UBERON:0007023!2.16e-09!115;UBERON:0000956!4.06e-09!25;UBERON:0000203!4.06e-09!25;UBERON:0002020!6.42e-09!34;UBERON:0003528!6.42e-09!34;UBERON:0002506!1.71e-08!1;UBERON:0001769!1.71e-08!1;UBERON:0003112!1.84e-08!1;UBERON:0000032!1.84e-08!1;UBERON:0005253!1.84e-08!1;UBERON:0003128!1.84e-08!1;UBERON:0002241!1.84e-08!1;UBERON:0001703!1.84e-08!1;UBERON:0004761!1.84e-08!1;UBERON:0009617!1.84e-08!1;UBERON:0001049!2.05e-08!57;UBERON:0005068!2.05e-08!57;UBERON:0006241!2.05e-08!57;UBERON:0007135!2.05e-08!57;UBERON:0002902!2.13e-08!1;UBERON:0009899!2.13e-08!1;UBERON:0002581!2.29e-08!1;UBERON:0002616!4.34e-08!59;UBERON:0002780!2.34e-07!41;UBERON:0001890!2.34e-07!41;UBERON:0006240!2.34e-07!41;UBERON:0003080!3.62e-07!42;UBERON:0001869!4.44e-07!32;UBERON:0002791!7.41e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0000305;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0000305,6.39e-07,7 | |||
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|short_description=p2@LOC149837 | |short_description=p2@LOC149837 | ||
}} | }} |
Latest revision as of 02:56, 17 September 2015
Short description: | p2@LOC149837 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC149837_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 88bp_to_NR_015406, uc002wmc.3_5end |
EntrezGene: | LOC149837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
amnion | 6.39e-07 | 7 |