FFCP PHASE1:Hg19::chr17:41322483..41322579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4077 | |EntrezGene=4077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6746 | |HGNC=6746 | ||
|TSSclassifier=strong | |||
|UniProt=Q14596 | |UniProt=Q14596 | ||
|association_with_transcript=0bp_to_ENST00000422280,NM_031858,NM_031862,uc010czd.2,uc010diz.2_5end | |association_with_transcript=0bp_to_ENST00000422280,NM_031858,NM_031862,uc010czd.2,uc010diz.2_5end | ||
|cluster_id=chr17:41322483..41322579,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_NBR1_5end | |description=CAGE_peak_2_at_NBR1_5end | ||
|id=chr17:41322483..41322579,+ | |id=chr17:41322483..41322579,+ | ||
|ontology_enrichment_celltype=CL:0000838!9.07e-11!52;CL:0000542!1.23e-10!53;CL:0000051!1.23e-10!53;CL:0000945!2.35e-08!24;CL:0000826!2.35e-08!24 | |ontology_enrichment_celltype=CL:0000838!9.07e-11!52;CL:0000542!1.23e-10!53;CL:0000051!1.23e-10!53;CL:0000945!2.35e-08!24;CL:0000826!2.35e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.97e-09;24!CL:0000542;5.28e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.95e-11,52;CL:0000542,1.08e-10,53;CL:0000051,1.08e-10,53;CL:0000945,2.13e-08,24;CL:0000826,2.13e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;5.28e-07;53 | |||
|ontology_enrichment_disease=DOID:14566!7.37e-13!239;DOID:162!2.62e-12!235;DOID:305!2.99e-12!106;DOID:0050687!3.52e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.40e-12,239;DOID:305,4.68e-12,106;DOID:162,4.97e-12,235;DOID:0050687,2.88e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.78e-11!115 | |ontology_enrichment_uberon=UBERON:0007023!1.78e-11!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.65e-11,114 | |||
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| ||
|short_description=p2@NBR1 | |short_description=p2@NBR1 | ||
}} | }} |
Latest revision as of 17:41, 24 September 2015
Short description: | p2@NBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NBR1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000422280, NM_031858, NM_031862, uc010czd.2, uc010diz.2_5end |
EntrezGene: | NBR1 |
HGNC: | 6746 |
UniProt: | Q14596 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.95e-11 | 52 |
lymphocyte | 1.08e-10 | 53 |
common lymphoid progenitor | 1.08e-10 | 53 |
lymphocyte of B lineage | 2.13e-08 | 24 |
pro-B cell | 2.13e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.65e-11 | 114 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.40e-12 | 239 |
carcinoma | 4.68e-12 | 106 |
cancer | 4.97e-12 | 235 |
cell type cancer | 2.88e-10 | 143 |