FFCP PHASE1:Hg19::chr17:66244154..66244268,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51321 | |EntrezGene=51321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28041 | |HGNC=28041 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002jgx.1_5end | |association_with_transcript=0bp_to_uc002jgx.1_5end | ||
|cluster_id=chr17:66244154..66244268,+ | |||
|description=CAGE_peak_1_at_AMZ2_5end | |description=CAGE_peak_1_at_AMZ2_5end | ||
|id=chr17:66244154..66244268,+ | |id=chr17:66244154..66244268,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.41e-08!180;CL:0002321!1.62e-07!248;CL:0000220!1.86e-07!246;CL:0000066!6.57e-07!254 | |ontology_enrichment_celltype=CL:0000055!1.41e-08!180;CL:0002321!1.62e-07!248;CL:0000220!1.86e-07!246;CL:0000066!6.57e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.52e-07,250;CL:0000066,4.35e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.56e-09!143 | |ontology_enrichment_disease=DOID:0050687!3.56e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.56e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.98e-14!365;UBERON:0004121!2.46e-09!169;UBERON:0000924!7.77e-09!173;UBERON:0006601!7.77e-09!173;UBERON:0000033!1.48e-07!123;UBERON:0000153!7.22e-07!129;UBERON:0007811!7.22e-07!129;UBERON:0003102!8.20e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.11e-08,171;UBERON:0000924,1.11e-08,171;UBERON:0006601,1.11e-08,171;UBERON:0003102,5.45e-07,99 | |||
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|short_description=p1@AMZ2 | |short_description=p1@AMZ2 | ||
}} | }} |
Latest revision as of 23:24, 16 September 2015
Short description: | p1@AMZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AMZ2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002jgx.1_5end |
EntrezGene: | AMZ2 |
HGNC: | 28041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.52e-07 | 250 |
epithelial cell | 4.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.11e-08 | 171 |
ectoderm | 1.11e-08 | 171 |
presumptive ectoderm | 1.11e-08 | 171 |
surface structure | 5.45e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.56e-09 | 143 |