FFCP PHASE1:Hg19::chr2:191878812..191878823,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6772 | |EntrezGene=6772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11362 | |HGNC=11362 | ||
|TSSclassifier=strong | |||
|UniProt=P42224 | |UniProt=P42224 | ||
|association_with_transcript=70bp_to_ENST00000392322_5end | |association_with_transcript=70bp_to_ENST00000392322_5end | ||
|cluster_id=chr2:191878812..191878823,- | |||
|description=CAGE_peak_2_at_STAT1_5end | |description=CAGE_peak_2_at_STAT1_5end | ||
|id=chr2:191878812..191878823,- | |id=chr2:191878812..191878823,- | ||
|ontology_enrichment_celltype=CL:0002057!3.11e-20!42;CL:0000860!1.80e-17!45;CL:0000766!4.54e-15!76;CL:0000048!1.00e-14!430;CL:0002194!1.09e-14!63;CL:0000576!1.09e-14!63;CL:0000040!1.09e-14!63;CL:0000559!1.09e-14!63;CL:0000723!1.45e-14!436;CL:0000034!5.38e-14!444;CL:0002009!2.23e-13!65;CL:0000134!2.83e-13!358;CL:0002320!8.06e-12!365;CL:0000557!1.09e-11!71;CL:0000839!2.16e-11!70;CL:0000738!8.09e-11!140;CL:0000219!1.05e-10!390;CL:0002087!2.45e-10!119;CL:0000012!5.34e-09!682;CL:0000144!9.20e-09!625;CL:0002371!9.55e-09!591;CL:0000548!1.26e-08!679;CL:0000004!1.26e-08!679;CL:0000255!1.26e-08!679;CL:0000063!3.39e-08!578;CL:0000003!3.94e-08!722;CL:0002031!1.61e-07!124;CL:0000988!5.13e-07!182;CL:0000763!5.26e-07!112;CL:0000049!5.26e-07!112 | |ontology_enrichment_celltype=CL:0002057!3.11e-20!42;CL:0000860!1.80e-17!45;CL:0000766!4.54e-15!76;CL:0000048!1.00e-14!430;CL:0002194!1.09e-14!63;CL:0000576!1.09e-14!63;CL:0000040!1.09e-14!63;CL:0000559!1.09e-14!63;CL:0000723!1.45e-14!436;CL:0000034!5.38e-14!444;CL:0002009!2.23e-13!65;CL:0000134!2.83e-13!358;CL:0002320!8.06e-12!365;CL:0000557!1.09e-11!71;CL:0000839!2.16e-11!70;CL:0000738!8.09e-11!140;CL:0000219!1.05e-10!390;CL:0002087!2.45e-10!119;CL:0000012!5.34e-09!682;CL:0000144!9.20e-09!625;CL:0002371!9.55e-09!591;CL:0000548!1.26e-08!679;CL:0000004!1.26e-08!679;CL:0000255!1.26e-08!679;CL:0000063!3.39e-08!578;CL:0000003!3.94e-08!722;CL:0002031!1.61e-07!124;CL:0000988!5.13e-07!182;CL:0000763!5.26e-07!112;CL:0000049!5.26e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-23;33!CL:0002057;1.78e-23;33!CL:0000473;5.31e-17;39!CL:0000234;5.31e-17;39!CL:0000576;9.92e-15;48!CL:0000766;1.06e-09;69!CL:0000081;9.55e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-27,42;CL:0002057,1.05e-27,42;CL:0000473,2.91e-24,48;CL:0000234,2.91e-24,48;CL:0000766,1.47e-18,72;CL:0002194,6.92e-17,59;CL:0000576,6.92e-17,59;CL:0000040,6.92e-17,59;CL:0000559,6.92e-17,59;CL:0002009,5.94e-16,61;CL:0000557,2.23e-14,67;CL:0000839,6.98e-14,66;CL:0000134,2.71e-13,354;CL:0002320,1.90e-12,361;CL:0000048,8.68e-12,427;CL:0000034,1.19e-11,441;CL:0000723,1.47e-11,433;CL:0000738,7.19e-11,136;CL:0000763,1.55e-10,108;CL:0000049,1.55e-10,108;CL:0000219,5.40e-10,386;CL:0002087,2.02e-09,115;CL:0000988,7.24e-09,177;CL:0000081,1.28e-08,11;CL:0002031,1.34e-07,120;CL:0000037,2.00e-07,168;CL:0002032,4.70e-07,161;CL:0000837,4.70e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.12e-14!102;UBERON:0003061!5.12e-14!102;UBERON:0002193!4.23e-13!112;UBERON:0002384!2.51e-11!375;UBERON:0002371!1.01e-10!80;UBERON:0004765!1.89e-10!101;UBERON:0001434!1.89e-10!101;UBERON:0001474!2.32e-10!86;UBERON:0002204!1.46e-09!167;UBERON:0003081!9.97e-08!216;UBERON:0002405!3.19e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.57e-16,98;UBERON:0003061,4.57e-16,98;UBERON:0002193,6.57e-14,108;UBERON:0002371,4.34e-13,76;UBERON:0002384,9.17e-12,371;UBERON:0001434,1.40e-11,100;UBERON:0001474,2.78e-11,82;UBERON:0002405,3.25e-11,93;UBERON:0004765,7.12e-11,90;UBERON:0003081,3.00e-10,203;UBERON:0002204,6.90e-09,167 | |||
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| ||
|short_description=p2@STAT1 | |short_description=p2@STAT1 | ||
}} | }} |
Latest revision as of 04:01, 19 September 2015
Short description: | p2@STAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000392322_5end |
EntrezGene: | STAT1 |
HGNC: | 11362 |
UniProt: | P42224 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.05e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-27 | 42 |
defensive cell | 2.91e-24 | 48 |
phagocyte | 2.91e-24 | 48 |
myeloid leukocyte | 1.47e-18 | 72 |
monopoietic cell | 6.92e-17 | 59 |
monocyte | 6.92e-17 | 59 |
monoblast | 6.92e-17 | 59 |
promonocyte | 6.92e-17 | 59 |
macrophage dendritic cell progenitor | 5.94e-16 | 61 |
granulocyte monocyte progenitor cell | 2.23e-14 | 67 |
myeloid lineage restricted progenitor cell | 6.98e-14 | 66 |
mesenchymal cell | 2.71e-13 | 354 |
connective tissue cell | 1.90e-12 | 361 |
multi fate stem cell | 8.68e-12 | 427 |
stem cell | 1.19e-11 | 441 |
somatic stem cell | 1.47e-11 | 433 |
leukocyte | 7.19e-11 | 136 |
myeloid cell | 1.55e-10 | 108 |
common myeloid progenitor | 1.55e-10 | 108 |
motile cell | 5.40e-10 | 386 |
nongranular leukocyte | 2.02e-09 | 115 |
hematopoietic cell | 7.24e-09 | 177 |
blood cell | 1.28e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 1.34e-07 | 120 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic oligopotent progenitor cell | 4.70e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.70e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.57e-16 | 98 |
blood island | 4.57e-16 | 98 |
hemolymphoid system | 6.57e-14 | 108 |
bone marrow | 4.34e-13 | 76 |
connective tissue | 9.17e-12 | 371 |
skeletal system | 1.40e-11 | 100 |
bone element | 2.78e-11 | 82 |
immune system | 3.25e-11 | 93 |
skeletal element | 7.12e-11 | 90 |
lateral plate mesoderm | 3.00e-10 | 203 |
musculoskeletal system | 6.90e-09 | 167 |