FFCP PHASE1:Hg19::chr2:209131059..209131070,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200576 | |EntrezGene=200576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23785 | |HGNC=23785 | ||
|TSSclassifier=strong | |||
|UniProt=C9JL08 | |UniProt=C9JL08 | ||
|association_with_transcript=-10bp_to_ENST00000422495_5end | |association_with_transcript=-10bp_to_ENST00000422495_5end | ||
|cluster_id=chr2:209131059..209131070,+ | |||
|description=CAGE_peak_3_at_PIKFYVE_5end | |description=CAGE_peak_3_at_PIKFYVE_5end | ||
|id=chr2:209131059..209131070,+ | |id=chr2:209131059..209131070,+ | ||
|ontology_enrichment_celltype=CL:0000037!9.40e-17!172;CL:0000566!9.40e-17!172;CL:0000988!4.44e-16!182;CL:0000542!1.55e-14!53;CL:0000051!1.55e-14!53;CL:0000838!5.68e-14!52;CL:0002032!5.90e-14!165;CL:0000837!5.90e-14!165;CL:0000738!1.25e-10!140;CL:0000084!7.32e-09!25;CL:0000827!7.32e-09!25;CL:0002031!2.05e-08!124;CL:0002087!1.49e-07!119;CL:0000791!1.56e-07!18;CL:0000789!1.56e-07!18;CL:0002420!1.56e-07!18;CL:0002419!1.56e-07!18;CL:0000790!1.56e-07!18 | |ontology_enrichment_celltype=CL:0000037!9.40e-17!172;CL:0000566!9.40e-17!172;CL:0000988!4.44e-16!182;CL:0000542!1.55e-14!53;CL:0000051!1.55e-14!53;CL:0000838!5.68e-14!52;CL:0002032!5.90e-14!165;CL:0000837!5.90e-14!165;CL:0000738!1.25e-10!140;CL:0000084!7.32e-09!25;CL:0000827!7.32e-09!25;CL:0002031!2.05e-08!124;CL:0002087!1.49e-07!119;CL:0000791!1.56e-07!18;CL:0000789!1.56e-07!18;CL:0002420!1.56e-07!18;CL:0002419!1.56e-07!18;CL:0000790!1.56e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.70e-10;11!CL:0000784;1.18e-08;3!CL:0000084;4.81e-08;25!CL:0000791;1.24e-07;18!CL:0000789;1.24e-07;18!CL:0002419;1.24e-07;18!CL:0000542;2.31e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.00e-16,168;CL:0000988,2.57e-15,177;CL:0002032,1.39e-13,161;CL:0000837,1.39e-13,161;CL:0000542,3.49e-11,53;CL:0000051,3.49e-11,53;CL:0000625,2.39e-10,11;CL:0000838,4.48e-10,52;CL:0000738,9.68e-10,136;CL:0000784,9.09e-09,3;CL:0000084,5.58e-08,25;CL:0000827,5.58e-08,25;CL:0000791,1.38e-07,18;CL:0000789,1.38e-07,18;CL:0002420,1.38e-07,18;CL:0002419,1.38e-07,18;CL:0000790,1.38e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.24e-07;18!CL:0000051;2.31e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!1.97e-12!51;DOID:0060083!1.97e-12!51;DOID:1240!2.02e-11!39;DOID:8692!5.42e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.50e-09;39!DOID:8692;4.78e-09;31!DOID:2531;2.05e-08;51!DOID:0060083;2.05e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.84e-12,39;DOID:2531,1.75e-11,51;DOID:0060083,1.75e-11,51;DOID:8692,4.63e-09,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.92e-07;2!UBERON:0005058;4.92e-07;2!UBERON:0009113;4.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.54e-07,4;UBERON:0005058,8.54e-07,4;UBERON:0009113,8.54e-07,4;UBERON:0003295,8.54e-07,4;UBERON:0005562,8.54e-07,4 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0.313454721478088,0.85870796139317,0.273748850145768,0.753255837568817,0.61130724598361,0.903106483949403,0.314843125254717,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0.697204805222715,0.568676929949686,0.880801318004542,0,0.601633342410425,0,0.447830948479849,0.647787332037959,0.77272670290256,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,1.5644487552606,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0,0,0,0.300353785683013,0,0,0,0,0,1.63841583378639,0.889509253863555,0,0,0.574752439954483,1.98313461835459,0,1.70763890732835,2.34894875748376,0.764546456250458,0,2.80254281490768,1.31692042387539,0.196709770113833,0.393010762749165,0.616804496998528,0.334372990781356,0.651844533267181,0,0,0.779873198196215,0.883817722424512,0.443067789167242,1.89562704635511,0.25618263945135,0.910415432919148,0.328875809207352,0.552700035571697,0,0,0.535081656179426,0,1.0197840842781,0.766440987203842,0.34362744548263,0.759059076058509,1.91139248594458,1.30216690771284,0,1.05402583354441,0.255973222308837,1.24930726552346,0.710331756132051,0.821127996921047,1.41124720257313,1.87208137048455,1.15859523106239,0,0,0,0.722878304769133,0,0,0,0,0.756278537312543,0.443458794925128,0.263504357079378,0.851363990735132,0,0,0,0.174129737299267,0.132957960518865,1.19245312152671,4.0039643754609,1.85728750664782,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0,0.367663080345869,0,0.0892997282840798,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0.570471821544449,0.149448680551801,0.469737994575059,0.161872944368132,0.561803226808994,0.204154171254893,0.61417158655884,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0.506328996723799,0,1.00973509697646,0,0.484938170456436,0,0.10075209822764,0,0,0,0,0.487894824518382,0.662648841607426,0.580969714347592,0.932949495138334,1.00928340350251,0,0,0.643240938192885,2.76269842704961,0,0,0.236613600079688,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,2.6487785964879,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,0.704387472105808,1.24396869324463,0.720599767084807,0.88369703398466,0.380987365753014,0,0,0,0,0,0.571652865261156,0,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.537182889719687,1.12085143993527,0.591092280605782,2.15627574859517,1.66845947163673,0.508189248444927,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,0,0,1.65766205374414,0.12269149171914,0.500170521059677,0.271265023699736,0,0.713715955188647,0.157702415033935,0.35142424497814,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0.82707210449155,0.647142602455851,1.06727557803444,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.355123450626254,0,0,0,0.241718899183244,0.200506470303285,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.647747748306418,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.309123034943167,0.27470839445503,0.495056999523528,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.307007349452259,0.413509717453592,0,0,0,0.178064071293475,0,0,0.127612712494584,0.2023155617111,0,0,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.286822704408103,0.196498082026242,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,1.29694662238543,1.08006287447623,0.79312517629427,0.854592569019785,0,0,1.48642540100575,0.721346064882224,1.84968792705877,0.797131363644112,0.399158742865633,0.5745161103971,1.90506224451495,1.29848776109822,1.96558024679421,1.14117339516596,0.313359791546046,0,1.52362600021443,0.481764225311099,0.605399121573143,1.27753871307098,1.03051603426729,0.614481528616916,1.11838053946208,0.834245708559542,0.586164286206121,0,1.23087398947712,0.270455678475983,1.6653598399891,1.4098700508785,0,0.146508179271894,0.121360521749513,0.557216921387392,0.568272293612826,0,0,0,1.9882952955326,0.2813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| ||
|short_description=p3@PIKFYVE | |short_description=p3@PIKFYVE | ||
}} | }} |
Latest revision as of 20:23, 19 September 2015
Short description: | p3@PIKFYVE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PIKFYVE_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000422495_5end |
EntrezGene: | PIKFYVE |
HGNC: | 23785 |
UniProt: | C9JL08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.00e-16 | 168 |
hematopoietic cell | 2.57e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.39e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-13 | 161 |
lymphocyte | 3.49e-11 | 53 |
common lymphoid progenitor | 3.49e-11 | 53 |
CD8-positive, alpha-beta T cell | 2.39e-10 | 11 |
lymphoid lineage restricted progenitor cell | 4.48e-10 | 52 |
leukocyte | 9.68e-10 | 136 |
plasmacytoid dendritic cell | 9.09e-09 | 3 |
T cell | 5.58e-08 | 25 |
pro-T cell | 5.58e-08 | 25 |
mature alpha-beta T cell | 1.38e-07 | 18 |
alpha-beta T cell | 1.38e-07 | 18 |
immature T cell | 1.38e-07 | 18 |
mature T cell | 1.38e-07 | 18 |
immature alpha-beta T cell | 1.38e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.54e-07 | 4 |
hemolymphoid system gland | 8.54e-07 | 4 |
thymic region | 8.54e-07 | 4 |
pharyngeal gland | 8.54e-07 | 4 |
thymus primordium | 8.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.84e-12 | 39 |
hematologic cancer | 1.75e-11 | 51 |
immune system cancer | 1.75e-11 | 51 |
myeloid leukemia | 4.63e-09 | 31 |