FFCP PHASE1:Hg19::chr12:115122153..115122159,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:115122153..115122159,+
|short_description=p@chr12:115122153..115122159,+
|description=CAGE_peak_at_chr12:115122153..115122159,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:115122153..115122159,+ | |||
|description=CAGE_peak_at_chr12:115122153..115122159,+ | |||
|id=chr12:115122153..115122159,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;7.86e-12;3!CL:1000428;7.86e-12;3!CL:0000359;5.53e-08;32!CL:0002595;1.70e-07;5!CL:0002559;2.84e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.13e-12,3;CL:1000428,5.13e-12,3;CL:0000359,5.26e-08,32;CL:0002595,2.02e-07,5;CL:0002559,2.21e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!7.76e-14!143;UBERON:0003104!1.03e-11!238;UBERON:0009142!1.03e-11!238;UBERON:0002100!6.58e-11!216;UBERON:0000914!3.04e-08!83;UBERON:0002329!3.04e-08!83;UBERON:0003077!3.04e-08!83;UBERON:0003059!3.04e-08!83;UBERON:0007282!3.04e-08!83;UBERON:0009618!3.04e-08!83;UBERON:0007285!3.04e-08!83;UBERON:0000481!7.19e-08!347;UBERON:0005911!7.44e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;7.86e-12;3!UBERON:0001992;7.86e-12;3!UBERON:0003834;1.70e-07;5!UBERON:0001533;1.70e-07;5!UBERON:0002073;2.84e-07;5!UBERON:0000478;4.23e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.13e-12,3;UBERON:0001992,5.13e-12,3;UBERON:0005256,5.10e-11,122;UBERON:0003104,6.43e-10,160;UBERON:0009142,6.43e-10,160;UBERON:0007503,1.33e-08,78;UBERON:0007524,3.68e-08,73;UBERON:0003834,2.02e-07,5;UBERON:0001533,2.02e-07,5;UBERON:0002073,2.21e-07,5;UBERON:0005086,2.21e-07,5;UBERON:0002329,2.67e-07,71;UBERON:0003059,2.67e-07,71;UBERON:0007282,2.67e-07,71;UBERON:0004290,2.67e-07,71;UBERON:0009618,2.67e-07,71;UBERON:0000478,2.99e-07,24;UBERON:0003077,3.70e-07,72;UBERON:0007285,3.70e-07,72;UBERON:0005631,6.76e-07,14;UBERON:0000158,6.76e-07,14;UBERON:0000486,7.39e-07,83 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,2.53299878168311,0,0.783556884599516,0.491467873003018,1.39560233594486,0,0.263766978228454,0.495065411840187,0.994192127183747,0,0,0,0.487932798790507,0.738726348460727,1.02000345622126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0.468642863667593,0,0,0.149448680551801,0.469737994575059,0.809364721840658,0.702254033511242,0,0.491337269247072,0.826606249406124,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.875829639103749,0.554128230968366,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.389748020644795,0,0.368199594569197,0,0.710019185033229,0.503760491138201,0.847802961552438,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0,0.882351781859152,0,0.949082476444386,1.75280700608214,0.588664395376038,0.38474715694639,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,1.32969058292435,3.12022310734098,0.257207374262142,0,1.0656887160644,0.428933980974443,3.25572963234866,0,0,0.710783897485092,0,0.301439377059586,0,0,0,0,0,0,0,0,0.723906533337896,1.84928690295345,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,1.05427273493442,0.601892199455438,0,1.03473071292505,0,0,0.347534457872331,0.391602314925481,0,0,0,0,3.63753085735511,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.464841513839837,0.483437798366489,0.802025881213139,0.276242966807689,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0.340187410553031,0.215915916102139,0,0.812839312631559,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,1.03041011647722,0,0,0,0,0,0.290012154876366,0.462145851343933,0,0.413509717453592,0,1.0151168573996,0.596586391912706,0.267096106940212,0,0,0,0,0,0.62962469366128,1.3940745403212,0.616067160352178,1.06461206063404,2.60979897622522,0,0,0,0,0,0.255897791311334,0,0,1.56989728039846,0,0,0.353437207037059,0,0,0,0,0.243713489631284,2.11300293513511,0.545999645631943,0.141405431953713,1.13008116620243,1.10273068709225,1.32687795048244,0.876901770507525,0.578775534266688,0,0,0.6196469961995,1.12678241012897,0,0,0,0.354761064070598,0,0,0.75894634753143,0,0,0,0,1.41215701165169,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0.95497793895076,0,0,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0.437299999980979,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0.278847488557207,0.153900517007594,0.227884111694002,0,0.359030577639089,0.108647371922008,1.5950057986596,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,1.77912677208373,0.741383633679017,0.417687798021821,0.067401132980677,0,0,0,0.19566461893209,0,3.15667522279512,0,0,0,1.9542044523884,0.414752765588989,0,0,0.941798755221676,0,0,0,0,0.195984794828755,0.261177619741208,0.17472666824203,0,2.90268993867255,6.35877058649814,2.87404099686232,0,0.176512253383001,0,0.137041924646751,0.19871461170299,0,0.586654148204409,0,0,0,0.288180834308212,0,0,0,0.124252535565433,0.235694034616795,0,0,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,2.32991899054908,0.472699093843342,0.329663433524666,0.13480708770837,0.295282444544246,0,0,0.136203406111576,0,0,0.415440338029185,0.2249738915515,0.77380195455795,0,0,0,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0.293104467356165,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.78602152549833,0.828478110694391,0,0,0,0,1.08803560673895,0,0.306345576763462,1.31149052283922,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0.691743174681154,0,0,0.285465333544967,0.235265819698172,0,1.01444720027578,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0,0.457680136793847,0.151230923763239,0.310874401165561,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,1.27294061441792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| ||
|short_description=p@chr12:115122153..115122159,+ | |||
}} | }} |
Latest revision as of 05:19, 24 July 2015
Short description: | p@chr12:115122153..115122159, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:115122153..115122159, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.13e-12 | 3 |
stem cell of epidermis | 5.13e-12 | 3 |
vascular associated smooth muscle cell | 5.26e-08 | 32 |
smooth muscle cell of the subclavian artery | 2.02e-07 | 5 |
hair follicle cell | 2.21e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.13e-12 | 3 |
papillary layer of dermis | 5.13e-12 | 3 |
trunk mesenchyme | 5.10e-11 | 122 |
mesenchyme | 6.43e-10 | 160 |
entire embryonic mesenchyme | 6.43e-10 | 160 |
epithelial vesicle | 1.33e-08 | 78 |
dense mesenchyme tissue | 3.68e-08 | 73 |
thoracic segment blood vessel | 2.02e-07 | 5 |
subclavian artery | 2.02e-07 | 5 |
hair follicle | 2.21e-07 | 5 |
hair follicle placode | 2.21e-07 | 5 |
somite | 2.67e-07 | 71 |
presomitic mesoderm | 2.67e-07 | 71 |
presumptive segmental plate | 2.67e-07 | 71 |
dermomyotome | 2.67e-07 | 71 |
trunk paraxial mesoderm | 2.67e-07 | 71 |
extraembryonic structure | 2.99e-07 | 24 |
paraxial mesoderm | 3.70e-07 | 72 |
presumptive paraxial mesoderm | 3.70e-07 | 72 |
extraembryonic membrane | 6.76e-07 | 14 |
membranous layer | 6.76e-07 | 14 |
multilaminar epithelium | 7.39e-07 | 83 |