FFCP PHASE1:Hg19::chr2:69614328..69614368,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2673 | |EntrezGene=2673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4241 | |HGNC=4241 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000361060_5end | |association_with_transcript=11bp_to_ENST00000361060_5end | ||
|cluster_id=chr2:69614328..69614368,- | |||
|description=CAGE_peak_1_at_GFPT1_5end | |description=CAGE_peak_1_at_GFPT1_5end | ||
|id=chr2:69614328..69614368,- | |id=chr2:69614328..69614368,- | ||
|ontology_enrichment_celltype=CL:0000055!1.93e-09!180;CL:0000057!1.47e-08!75;CL:0000359!4.36e-07!32 | |ontology_enrichment_celltype=CL:0000055!1.93e-09!180;CL:0000057!1.47e-08!75;CL:0000359!4.36e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.47e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.16e-09,76;CL:0000359,4.36e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.44e-10!143;DOID:305!7.42e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.44e-10,143;DOID:305,7.42e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002323!5.59e-11!46;UBERON:0004119!6.22e-11!169;UBERON:0000925!6.22e-11!169;UBERON:0006595!6.22e-11!169;UBERON:0001007!8.94e-11!155;UBERON:0001555!8.94e-11!155;UBERON:0007026!8.94e-11!155;UBERON:0002100!1.33e-10!216;UBERON:0005156!4.49e-10!59;UBERON:0000990!4.49e-10!59;UBERON:0000466!7.30e-10!126;UBERON:0004458!2.09e-09!49;UBERON:0003104!2.46e-09!238;UBERON:0009142!2.46e-09!238;UBERON:0005911!1.73e-08!82;UBERON:0004921!1.89e-08!129;UBERON:0004185!1.89e-08!129;UBERON:0003133!4.21e-08!48;UBERON:0000077!7.83e-08!130;UBERON:0004176!1.28e-07!22;UBERON:0000991!2.14e-07!21;UBERON:0009196!2.14e-07!21;UBERON:0009117!2.14e-07!21;UBERON:0005564!2.14e-07!21;UBERON:0003929!2.41e-07!54;UBERON:0005409!3.11e-07!35;UBERON:0003102!4.48e-07!95;UBERON:0000160!5.53e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002323;4.34e-08;45!UBERON:0002553;1.85e-07;52!UBERON:0000991;2.14e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.10e-11,199;UBERON:0002323,5.59e-11,46;UBERON:0005156,4.49e-10,59;UBERON:0000990,4.49e-10,59;UBERON:0004458,2.09e-09,49;UBERON:0004119,2.21e-09,160;UBERON:0000925,2.21e-09,160;UBERON:0006595,2.21e-09,160;UBERON:0001007,4.45e-09,145;UBERON:0001555,4.45e-09,145;UBERON:0007026,4.45e-09,145;UBERON:0005911,1.73e-08,82;UBERON:0003133,4.21e-08,48;UBERON:0004176,1.28e-07,22;UBERON:0003102,1.97e-07,99;UBERON:0002553,2.02e-07,61;UBERON:0000991,2.14e-07,21;UBERON:0009196,2.14e-07,21;UBERON:0009117,2.14e-07,21;UBERON:0005564,2.14e-07,21;UBERON:0003929,2.41e-07,54;UBERON:0003886,5.85e-07,54;UBERON:0004921,7.27e-07,118 | |||
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| ||
|short_description=p1@GFPT1 | |short_description=p1@GFPT1 | ||
}} | }} |
Latest revision as of 03:54, 18 September 2015
Short description: | p1@GFPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GFPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000361060_5end |
EntrezGene: | GFPT1 |
HGNC: | 4241 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.16e-09 | 76 |
vascular associated smooth muscle cell | 4.36e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.10e-11 | 199 |
body cavity | 5.59e-11 | 46 |
reproductive structure | 4.49e-10 | 59 |
reproductive system | 4.49e-10 | 59 |
body cavity or lining | 2.09e-09 | 49 |
endoderm-derived structure | 2.21e-09 | 160 |
endoderm | 2.21e-09 | 160 |
presumptive endoderm | 2.21e-09 | 160 |
digestive system | 4.45e-09 | 145 |
digestive tract | 4.45e-09 | 145 |
primitive gut | 4.45e-09 | 145 |
endo-epithelium | 1.73e-08 | 82 |
reproductive organ | 4.21e-08 | 48 |
external genitalia | 1.28e-07 | 22 |
surface structure | 1.97e-07 | 99 |
anatomical cavity | 2.02e-07 | 61 |
gonad | 2.14e-07 | 21 |
indifferent external genitalia | 2.14e-07 | 21 |
indifferent gonad | 2.14e-07 | 21 |
gonad primordium | 2.14e-07 | 21 |
gut epithelium | 2.41e-07 | 54 |
body cavity precursor | 5.85e-07 | 54 |
subdivision of digestive tract | 7.27e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.44e-10 | 143 |
carcinoma | 7.42e-09 | 106 |