FFCP PHASE1:Hg19::chr12:123636335..123636355,-: Difference between revisions
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|id=chr12:123636335..123636355,-
|short_description=p@chr12:123636335..123636355,-
|description=CAGE_peak_at_chr12:123636335..123636355,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:123636335..123636355,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr12:123636335..123636355,- | |||
|id=chr12:123636335..123636355,- | |||
|ontology_enrichment_celltype=CL:0000039!7.22e-08!7;CL:0000586!7.22e-08!7;CL:0000313!4.25e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.07e-17;2!UBERON:0003056;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:2152!4.25e-07!1;DOID:3371!4.78e-07!1;DOID:4549!4.78e-07!1;DOID:5861!4.78e-07!1;DOID:6496!4.78e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!3.94e-13!4;UBERON:0002435!3.94e-13!4;UBERON:0000204!3.94e-13!4;UBERON:0010082!3.94e-13!4;UBERON:0005383!2.16e-08!3;UBERON:0005382!2.16e-08!3;UBERON:0007023!8.94e-08!115;UBERON:0009663!1.05e-07!7;UBERON:0001869!2.93e-07!32;UBERON:0004911!4.25e-07!1;UBERON:0002370!5.86e-07!4;UBERON:0005058!5.86e-07!4;UBERON:0009113!5.86e-07!4;UBERON:0003295!5.86e-07!4;UBERON:0005562!5.86e-07!4;UBERON:0000473!6.18e-07!8;UBERON:0001882!7.15e-07!1;UBERON:0005403!7.15e-07!1;UBERON:0001874!8.02e-07!1;UBERON:0001893!8.51e-07!34;UBERON:0007190!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.41e-67;2!UBERON:0005058;7.41e-67;2!UBERON:0009113;7.41e-67;2!UBERON:0004177;1.59e-27;5!UBERON:0005057;1.59e-27;5!UBERON:0000966;7.01e-08;5!UBERON:0005388;7.01e-08;5!UBERON:0001802;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.28e-34,4;UBERON:0005058,4.28e-34,4;UBERON:0009113,4.28e-34,4;UBERON:0003295,4.28e-34,4;UBERON:0005562,4.28e-34,4;UBERON:0003351,3.88e-23,6;UBERON:0004177,5.35e-20,7;UBERON:0005057,5.35e-20,7;UBERON:0000974,2.49e-14,10;UBERON:0003408,2.49e-14,10;UBERON:0001042,2.49e-14,10;UBERON:0009145,2.49e-14,10;UBERON:0006562,4.00e-13,11;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0008814,2.09e-08,18;UBERON:0001557,5.16e-08,19;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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|short_description=p@chr12:123636335..123636355,- | |||
}} | }} |
Latest revision as of 06:14, 24 July 2015
Short description: | p@chr12:123636335..123636355, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:123636335..123636355, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.28e-34 | 4 |
hemolymphoid system gland | 4.28e-34 | 4 |
thymic region | 4.28e-34 | 4 |
pharyngeal gland | 4.28e-34 | 4 |
thymus primordium | 4.28e-34 | 4 |
pharyngeal epithelium | 3.88e-23 | 6 |
hemopoietic organ | 5.35e-20 | 7 |
immune organ | 5.35e-20 | 7 |
neck | 2.49e-14 | 10 |
gland of gut | 2.49e-14 | 10 |
chordate pharynx | 2.49e-14 | 10 |
pharyngeal region of foregut | 2.49e-14 | 10 |
pharynx | 4.00e-13 | 11 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
pharyngeal arch system | 2.09e-08 | 18 |
upper respiratory tract | 5.16e-08 | 19 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |