FFCP PHASE1:Hg19::chr12:130617944..130617953,+: Difference between revisions
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|id=chr12:130617944..130617953,+
|short_description=p@chr12:130617944..130617953,+
|description=CAGE_peak_at_chr12:130617944..130617953,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:130617944..130617953,+ | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_at_chr12:130617944..130617953,+ | |||
|id=chr12:130617944..130617953,+ | |||
|ontology_enrichment_celltype=CL:0002150!2.30e-17!3;CL:0000861!2.30e-17!3;CL:1000415!1.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000214;4.09e-23;3!CL:0000153;1.21e-08;9!CL:0000447;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,4.09e-23,3;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!3.50e-14!1;DOID:1357!3.50e-14!1;DOID:3493!1.54e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.71e-66;1!DOID:1357;1.71e-66;1!DOID:5409;8.00e-18;4!DOID:0050615;1.27e-17;16!DOID:1325;8.57e-11;7!DOID:3904;8.57e-11;7!DOID:3905;1.08e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.39e-66,1;DOID:1357,2.39e-66,1;DOID:5409,7.35e-18,4;DOID:0050615,1.27e-17,16;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.50e-14!1;UBERON:0001825!3.50e-14!1;UBERON:0001301!5.15e-14!1;UBERON:0000989!5.85e-14!1;UBERON:0008811!5.85e-14!1;UBERON:0006258!5.85e-14!1;UBERON:0005876!5.85e-14!1;UBERON:0004874!5.85e-14!1;UBERON:0006834!6.65e-14!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.71e-66;1!UBERON:0001825;1.71e-66;1!UBERON:0006915;4.09e-23;3!UBERON:0007616;4.09e-23;3!UBERON:0002217;4.09e-23;3!UBERON:0002018;4.09e-23;3!UBERON:0004905;1.47e-09;8!UBERON:0000982;1.47e-09;8!UBERON:0004770;1.47e-09;8!UBERON:0004457;1.21e-08;9!UBERON:0000042;1.21e-08;9!UBERON:0000486;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.39e-66,1;UBERON:0001825,2.39e-66,1;UBERON:0006915,4.09e-23,3;UBERON:0007616,4.09e-23,3;UBERON:0002217,4.09e-23,3;UBERON:0002018,4.09e-23,3;UBERON:0004905,1.47e-09,8;UBERON:0000982,1.47e-09,8;UBERON:0004770,1.47e-09,8;UBERON:0004457,8.38e-07,12;UBERON:0000042,8.38e-07,12 | |||
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|short_description=p@chr12:130617944..130617953,+ | |||
}} | }} |
Latest revision as of 06:44, 24 July 2015
Short description: | p@chr12:130617944..130617953, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:130617944..130617953, + |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 4.09e-23 | 3 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.39e-66 | 1 |
paranasal sinus | 2.39e-66 | 1 |
stratified squamous epithelium | 4.09e-23 | 3 |
layer of synovial tissue | 4.09e-23 | 3 |
synovial joint | 4.09e-23 | 3 |
synovial membrane of synovial joint | 4.09e-23 | 3 |
articulation | 1.47e-09 | 8 |
skeletal joint | 1.47e-09 | 8 |
articular system | 1.47e-09 | 8 |
cavity lining | 8.38e-07 | 12 |
serous membrane | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.39e-66 | 1 |
maxillary sinus cancer | 2.39e-66 | 1 |
lung small cell carcinoma | 7.35e-18 | 4 |
respiratory system cancer | 1.27e-17 | 16 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |