FFCP PHASE1:Hg19::chr12:13068454..13068484,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:13068454..13068484,+
|short_description=p1@MIR614
|description=CAGE_peak_1_at_MIR614_5end
|association_with_transcript=-278bp_to_NR_030345_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=693199 | |EntrezGene=693199 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=32870 | |HGNC=32870 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-278bp_to_NR_030345_5end | |||
|cluster_id=chr12:13068454..13068484,+ | |||
|coexpression_cluster_id=C814 | |||
|description=CAGE_peak_1_at_MIR614_5end | |||
|id=chr12:13068454..13068484,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.38e-27!254;CL:0000077!6.51e-11!19;CL:0002076!9.50e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.41e-18;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.76e-27,253;CL:0000077,5.67e-18,19;CL:0000076,1.33e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.63e-13;29 | |||
|ontology_enrichment_disease=DOID:305!2.74e-24!106;DOID:0050687!9.42e-21!143;DOID:14566!2.06e-12!239;DOID:162!3.84e-11!235;DOID:299!1.97e-09!25;DOID:1749!2.05e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.35e-09;25!DOID:305;4.49e-09;106!DOID:1749;2.98e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.47e-30,106;DOID:0050687,6.76e-25,143;DOID:14566,2.18e-18,239;DOID:162,1.29e-17,235;DOID:299,3.70e-09,25;DOID:1749,3.40e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.55e-15!169;UBERON:0000925!4.55e-15!169;UBERON:0006595!4.55e-15!169;UBERON:0001007!1.83e-14!155;UBERON:0001555!1.83e-14!155;UBERON:0007026!1.83e-14!155;UBERON:0004921!1.50e-13!129;UBERON:0004185!1.50e-13!129;UBERON:0000077!2.59e-10!130;UBERON:0000065!7.15e-10!53;UBERON:0008947!8.38e-10!38;UBERON:0003258!8.38e-10!38;UBERON:0003104!2.94e-09!238;UBERON:0009142!2.94e-09!238;UBERON:0005153!8.59e-08!37;UBERON:0003064!8.74e-08!37;UBERON:0001046!1.28e-07!19;UBERON:0000063!1.45e-07!97;UBERON:0001737!1.76e-07!9;UBERON:0000072!2.15e-07!46;UBERON:0000481!2.17e-07!347;UBERON:0005157!5.96e-07!51;UBERON:0005911!6.71e-07!82;UBERON:0001008!7.18e-07!45;UBERON:0000162!7.48e-07!14;UBERON:0001353!7.48e-07!14;UBERON:0000163!7.48e-07!14;UBERON:0006866!7.48e-07!14;UBERON:0000164!7.48e-07!14;UBERON:0000931!7.48e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.64e-13;9!UBERON:0001557;3.64e-13;9!UBERON:0002367;8.86e-10;11!UBERON:0010147;8.86e-10;11!UBERON:0003937;8.47e-09;12!UBERON:0005399;8.47e-09;12!UBERON:0000065;7.76e-07;44!UBERON:0005631;8.59e-07;10!UBERON:0000158;8.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.11e-13,9;UBERON:0004921,1.21e-12,118;UBERON:0001007,5.29e-11,145;UBERON:0001555,5.29e-11,145;UBERON:0007026,5.29e-11,145;UBERON:0005153,3.69e-10,37;UBERON:0008947,4.48e-10,38;UBERON:0003258,4.48e-10,38;UBERON:0002367,7.62e-10,11;UBERON:0010147,7.62e-10,11;UBERON:0009846,7.62e-10,11;UBERON:0003353,7.62e-10,11;UBERON:0004902,7.62e-10,11;UBERON:0003820,7.62e-10,11;UBERON:0009847,7.62e-10,11;UBERON:0004119,1.75e-09,160;UBERON:0000925,1.75e-09,160;UBERON:0006595,1.75e-09,160;UBERON:0003937,7.39e-09,12;UBERON:0005399,7.39e-09,12;UBERON:0005157,1.18e-08,47;UBERON:0001557,9.36e-08,19;UBERON:0001046,1.23e-07,19;UBERON:0005911,2.55e-07,82;UBERON:0000162,2.58e-07,14;UBERON:0001353,2.58e-07,14;UBERON:0000163,2.58e-07,14;UBERON:0006866,2.58e-07,14;UBERON:0000164,2.58e-07,14;UBERON:0000931,2.58e-07,14;UBERON:0000065,3.36e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.68600904752263,3.48900583986214,0,0.263766978228454,0.618831764800233,0.994192127183747,0,0,0,0,0,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0.918251677112708,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0.251248665256743,0,0.217188844705117,2.42159801053347,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.89151321907653,0,1.88300474649071,0,0.486634870302636,0,0.443458794925128,0.790513071238134,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0.71153252537342,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0.993943903390637,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,1.4351170855109,0,0.211931901159562,1.20036438433761,0,0.772921620136887,0.37223371266318,0,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,2.72105640091641,4.04603256187444,2.89213235860178,4.85293480022533,4.35758888184812,3.32178866755535,1.75280700608214,2.35465758150415,3.07797725557112,0,0,0,0,0,0,0,0,2.45976877086227,3.08822058537346,0,0,0,0.0925884451585296,0,1.03993478527958,8.6598805215164,0.231860809950154,0.352226082707465,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.503946384596579,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.2933531432838,0.258543431515556,0,0,2.39344304926383,7.28052058379563,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0.904318131178758,0,5.29856853264902,0,0,0,0.239624855491583,0,0,0,1.84928690295345,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.36807447515742,0.500170521059677,0.813795071099207,2.07970861530807,0.892144943985809,1.10391690523754,0.468565659970853,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0.116210378459959,3.62578348774867,8.02025881213139,3.49907757956406,1.14814448164607,1.45672934405374,1.96686622439136,1.35359883872224,1.77135275340154,0,0,1.05551628892876,0,0.510281115829547,0.647747748306418,0,0.270946437543853,0.501689773854853,2.80363900349542,0.831076008928724,1.34324852833307,0,0,1.53870075069834,4.92021968549559,0.325378394664303,0.824328093181778,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0,0,0.0852266274161009,0,0.661139661443912,0.768760269460425,0.765676274967505,0.30347334256665,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0.571890581771475,0.255897791311334,0,0,0,0,0.54907405947211,0.706874414074119,0,1.58510321173008,0,0.48763373908959,0.731140468893853,2.11300293513511,0.9554993798559,2.12108147930569,0,0,0.66343897524122,1.31535265576129,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.491245205065606,0,0.354761064070598,1.26664581178598,1.31717957183961,0.75894634753143,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.941438007767792,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.28188885352968,0,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0.146508179271894,0,0,1.42068073403207,3.34242278632766,0.593929361665277,1.53580351049616,0,0,0,0,0.422250816255987,3.38721580026819,0.276283915531148,0,0.20453736500431,0,0,4.673154259661,2.68531762013414,0,0.493217028184668,0,0,0,0,0,1.04171104434093,0,0.724999575434793,3.18621655199399,3.0510438035132,1.65471377237555,0,0,0,0,0,0,0,0,0,0.871507708151921,1.81250867562184,0.384751292518985,0.683652335082007,0,0,1.62971057883012,3.19001159731919,1.19076871422421,3.73124343213044,0,0,0,0,0,0,0,0,1.47698645169619,3.7543545876604,0.424059214301822,0,4.97630965539252,0.176915129006678,8.55442202907076,0,0,0,0,0,0,0,0.978323094660449,2.67058417487502,0,0,0.91821828489147,0,0,0.207376382794494,0.664653872707185,1.65495977937749,0.627865836814451,1.19472429772959,0.284609546029793,0.416024019039416,2.60339607502696,1.27390116638691,1.65412492502765,0.698906672968121,0,3.09620260125072,2.70430473218887,3.03827191096874,0,0,0.677942222341597,1.09633539717401,0.19871461170299,0,7.43095254392251,0.240476460754601,0.426905989478705,0.39961921916426,3.31407959454444,0,0,3.60136994970374,0.124252535565433,0.707082103850386,0.271808412147228,0,0.305994652908965,0,0,0,0,0.429765441419957,0.262887354279314,0.558564802544508,0.2291604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| ||
|short_description=p1@MIR614 | |||
}} | }} |
Latest revision as of 08:38, 17 September 2015
Short description: | p1@MIR614 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR614_5end |
Coexpression cluster: | C814_Alveolar_mesothelioma_bile_Renal_papillotubular_papillary_serous |
Association with transcript: | -278bp_to_NR_030345_5end |
EntrezGene: | MIR614 |
HGNC: | 32870 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.76e-27 | 253 |
mesothelial cell | 5.67e-18 | 19 |
squamous epithelial cell | 1.33e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.11e-13 | 9 |
subdivision of digestive tract | 1.21e-12 | 118 |
digestive system | 5.29e-11 | 145 |
digestive tract | 5.29e-11 | 145 |
primitive gut | 5.29e-11 | 145 |
epithelial bud | 3.69e-10 | 37 |
respiratory primordium | 4.48e-10 | 38 |
endoderm of foregut | 4.48e-10 | 38 |
prostate gland | 7.62e-10 | 11 |
male accessory sex gland | 7.62e-10 | 11 |
embryonic cloacal epithelium | 7.62e-10 | 11 |
epithelium of hindgut | 7.62e-10 | 11 |
urogenital sinus epithelium | 7.62e-10 | 11 |
prostate bud | 7.62e-10 | 11 |
prostate field | 7.62e-10 | 11 |
endoderm-derived structure | 1.75e-09 | 160 |
endoderm | 1.75e-09 | 160 |
presumptive endoderm | 1.75e-09 | 160 |
sex gland | 7.39e-09 | 12 |
male reproductive gland | 7.39e-09 | 12 |
epithelial fold | 1.18e-08 | 47 |
upper respiratory tract | 9.36e-08 | 19 |
hindgut | 1.23e-07 | 19 |
endo-epithelium | 2.55e-07 | 82 |
cloaca | 2.58e-07 | 14 |
anal region | 2.58e-07 | 14 |
embryonic cloaca | 2.58e-07 | 14 |
terminal part of digestive tract | 2.58e-07 | 14 |
primitive urogenital sinus | 2.58e-07 | 14 |
proctodeum | 2.58e-07 | 14 |
respiratory tract | 3.36e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.47e-30 | 106 |
cell type cancer | 6.76e-25 | 143 |
disease of cellular proliferation | 2.18e-18 | 239 |
cancer | 1.29e-17 | 235 |
adenocarcinoma | 3.70e-09 | 25 |
squamous cell carcinoma | 3.40e-07 | 14 |