FFCP PHASE1:Hg19::chr12:130822445..130822458,+: Difference between revisions
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|id=chr12:130822445..130822458,+
|short_description=p3@PIWIL1
|description=CAGE_peak_3_at_PIWIL1_5end
|association_with_transcript=12bp_to_NM_001190971,NM_004764_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9271 | |EntrezGene=9271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9007 | |HGNC=9007 | ||
|TSSclassifier=strong | |||
|UniProt=Q96J94 | |UniProt=Q96J94 | ||
|association_with_transcript=12bp_to_NM_001190971,NM_004764_5end | |||
|cluster_id=chr12:130822445..130822458,+ | |||
|coexpression_cluster_id=C3254 | |||
|description=CAGE_peak_3_at_PIWIL1_5end | |||
|id=chr12:130822445..130822458,+ | |||
|ontology_enrichment_celltype=CL:0002178!4.58e-10!3;CL:0000039!2.18e-09!7;CL:0000586!2.18e-09!7;CL:0002566!1.21e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.40e-10;7!CL:0000586;2.40e-10;7!CL:0000214;6.69e-07;3!CL:0002178;7.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.35e-10,7;CL:0000586,2.35e-10,7;CL:0000214,6.88e-07,3;CL:0002178,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.41e-26;10!UBERON:0005564;1.41e-26;10 | |||
|ontology_enrichment_disease=DOID:0050619!1.65e-08!1;DOID:1357!1.65e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.90e-18;1!DOID:1357;2.90e-18;1!DOID:3493;1.12e-09;2!DOID:3095;2.26e-07;22!DOID:2994;2.26e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.66e-18,1;DOID:1357,2.66e-18,1;DOID:3493,1.12e-09,2;DOID:3095,2.21e-07,22;DOID:2994,2.21e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.08e-21!8;UBERON:0003135!1.58e-15!11;UBERON:0000945!1.24e-13!8;UBERON:0010039!1.24e-13!8;UBERON:0003101!1.16e-10!22;UBERON:0000079!1.16e-10!22;UBERON:0002110!6.00e-10!3;UBERON:0006242!6.00e-10!3;UBERON:0004458!8.13e-10!49;UBERON:0005383!1.22e-09!3;UBERON:0005382!1.22e-09!3;UBERON:0001764!1.65e-08!1;UBERON:0001825!1.65e-08!1;UBERON:0002323!2.68e-08!46;UBERON:0000991!5.00e-08!21;UBERON:0009196!5.00e-08!21;UBERON:0009117!5.00e-08!21;UBERON:0005564!5.00e-08!21;UBERON:0001874!6.63e-08!1;UBERON:0004176!1.19e-07!22;UBERON:0000369!1.94e-07!4;UBERON:0002435!1.94e-07!4;UBERON:0000204!1.94e-07!4;UBERON:0010082!1.94e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.31e-33;8!UBERON:0003135;3.32e-24;11!UBERON:0001764;2.90e-18;1!UBERON:0001825;2.90e-18;1!UBERON:0000991;7.18e-13;21!UBERON:0003101;2.67e-12;22!UBERON:0000079;2.67e-12;22!UBERON:0003133;3.22e-07;44!UBERON:0006915;6.69e-07;3!UBERON:0007616;6.69e-07;3!UBERON:0002217;6.69e-07;3!UBERON:0002018;6.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.31e-33,8;UBERON:0003135,3.32e-24,11;UBERON:0001764,2.66e-18,1;UBERON:0001825,2.66e-18,1;UBERON:0000991,7.18e-13,21;UBERON:0009196,7.18e-13,21;UBERON:0009117,7.18e-13,21;UBERON:0005564,7.18e-13,21;UBERON:0004176,2.67e-12,22;UBERON:0003101,2.67e-12,22;UBERON:0000079,2.67e-12,22;UBERON:0003133,1.29e-08,48;UBERON:0004458,1.79e-08,49;UBERON:0005156,5.26e-07,59;UBERON:0000990,5.26e-07,59;UBERON:0006915,6.88e-07,3;UBERON:0007616,6.88e-07,3;UBERON:0002217,6.88e-07,3;UBERON:0002018,6.88e-07,3;UBERON:0002553,8.08e-07,61 | |||
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|short_description=p3@PIWIL1 | |||
}} | }} |
Latest revision as of 08:44, 17 September 2015
Short description: | p3@PIWIL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PIWIL1_5end |
Coexpression cluster: | C3254_maxillary_adenocarcinoma_testicular_testis_synovial_small_peripheral |
Association with transcript: | 12bp_to_NM_001190971, NM_004764_5end |
EntrezGene: | PIWIL1 |
HGNC: | 9007 |
UniProt: | Q96J94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.35e-10 | 7 |
germ cell | 2.35e-10 | 7 |
synovial cell | 6.88e-07 | 3 |
epithelial cell of stomach | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.31e-33 | 8 |
male reproductive organ | 3.32e-24 | 11 |
maxillary sinus | 2.66e-18 | 1 |
paranasal sinus | 2.66e-18 | 1 |
gonad | 7.18e-13 | 21 |
indifferent external genitalia | 7.18e-13 | 21 |
indifferent gonad | 7.18e-13 | 21 |
gonad primordium | 7.18e-13 | 21 |
external genitalia | 2.67e-12 | 22 |
male organism | 2.67e-12 | 22 |
male reproductive system | 2.67e-12 | 22 |
reproductive organ | 1.29e-08 | 48 |
body cavity or lining | 1.79e-08 | 49 |
reproductive structure | 5.26e-07 | 59 |
reproductive system | 5.26e-07 | 59 |
stratified squamous epithelium | 6.88e-07 | 3 |
layer of synovial tissue | 6.88e-07 | 3 |
synovial joint | 6.88e-07 | 3 |
synovial membrane of synovial joint | 6.88e-07 | 3 |
anatomical cavity | 8.08e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.66e-18 | 1 |
maxillary sinus cancer | 2.66e-18 | 1 |
signet ring cell adenocarcinoma | 1.12e-09 | 2 |
germ cell and embryonal cancer | 2.21e-07 | 22 |
germ cell cancer | 2.21e-07 | 22 |