FFCP PHASE1:Hg19::chr3:129279438..129279448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23129 | |EntrezGene=23129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9107 | |HGNC=9107 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-181bp_to_ENST00000512807_5end | |association_with_transcript=-181bp_to_ENST00000512807_5end | ||
|cluster_id=chr3:129279438..129279448,- | |||
|description=CAGE_peak_17_at_PLXND1_5end | |description=CAGE_peak_17_at_PLXND1_5end | ||
|id=chr3:129279438..129279448,- | |id=chr3:129279438..129279448,- | ||
|ontology_enrichment_celltype=CL:0002620!5.80e-25!23;CL:0000057!4.71e-22!75;CL:0000055!3.93e-19!180;CL:0002556!2.49e-09!6;CL:0002551!4.90e-09!6;CL:0000144!3.45e-08!625 | |ontology_enrichment_celltype=CL:0002620!5.80e-25!23;CL:0000057!4.71e-22!75;CL:0000055!3.93e-19!180;CL:0002556!2.49e-09!6;CL:0002551!4.90e-09!6;CL:0000144!3.45e-08!625 | ||
|ontology_enrichment_celltype_v019=CL:0002367;1.33e-29;2!CL:0002556;2.29e-10;6!CL:0002363;1.39e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,6.96e-30,2;CL:0002556,1.90e-10,6;CL:0002363,1.39e-08,2;CL:0000008,1.39e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.39e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;7.45e-16;1!DOID:74;1.39e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,6.44e-16,1;DOID:74,1.29e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.42e-15!40;UBERON:0003102!2.61e-15!95;UBERON:0002199!3.05e-13!45;UBERON:0002416!3.05e-13!45;UBERON:0001758!2.49e-09!6;UBERON:0003672!2.49e-09!6;UBERON:0000075!2.14e-07!13;UBERON:0005944!2.14e-07!13;UBERON:0004288!2.14e-07!13;UBERON:0003089!2.14e-07!13;UBERON:0003129!9.39e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;1.33e-29;2!UBERON:0003956;1.33e-29;2!UBERON:0002203;1.53e-10;6!UBERON:0001768;1.53e-10;6!UBERON:0002200;1.53e-10;6!UBERON:0001758;2.29e-10;6!UBERON:0003672;2.29e-10;6!UBERON:0001801;7.15e-10;14!UBERON:0001444;4.73e-09;48!UBERON:0003129;5.15e-09;7!UBERON:0003566;1.39e-08;2!UBERON:0001777;1.39e-08;2!UBERON:0000153;2.47e-08;54!UBERON:0007811;7.66e-08;52!UBERON:0000019;2.06e-07;19!UBERON:0000047;2.06e-07;19!UBERON:0004088;2.06e-07;19!UBERON:0010230;2.06e-07;19!UBERON:0000033;3.46e-07;50!UBERON:0000970;4.57e-07;20!UBERON:0002104;9.40e-07;21!UBERON:0001456;9.40e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,6.96e-30,2;UBERON:0003956,6.96e-30,2;UBERON:0002203,1.24e-10,6;UBERON:0001768,1.24e-10,6;UBERON:0002200,1.24e-10,6;UBERON:0001758,1.90e-10,6;UBERON:0003672,1.90e-10,6;UBERON:0001444,3.10e-10,49;UBERON:0001801,6.24e-10,14;UBERON:0003129,4.39e-09,7;UBERON:0000033,6.43e-09,56;UBERON:0003566,1.39e-08,2;UBERON:0001777,1.39e-08,2;UBERON:0000153,5.04e-08,62;UBERON:0007811,5.04e-08,62;UBERON:0000019,4.16e-07,20;UBERON:0000047,4.16e-07,20;UBERON:0010312,4.16e-07,20;UBERON:0004088,4.16e-07,20;UBERON:0010230,4.16e-07,20;UBERON:0003072,4.16e-07,20;UBERON:0004128,4.16e-07,20;UBERON:0003071,4.16e-07,20;UBERON:0000970,8.60e-07,21;UBERON:0002104,8.60e-07,21 | |||
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| ||
|short_description=p17@PLXND1 | |short_description=p17@PLXND1 | ||
}} | }} |
Latest revision as of 17:45, 24 September 2015
Short description: | p17@PLXND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PLXND1_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_ENST00000512807_5end |
EntrezGene: | PLXND1 |
HGNC: | 9107 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 6.96e-30 | 2 |
fibroblast of periodontium | 1.90e-10 | 6 |
keratocyte | 1.39e-08 | 2 |
migratory cranial neural crest cell | 1.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 6.96e-30 | 2 |
aqueous drainage system | 6.96e-30 | 2 |
vasculature of eye | 1.24e-10 | 6 |
uvea | 1.24e-10 | 6 |
vasculature of head | 1.24e-10 | 6 |
periodontium | 1.90e-10 | 6 |
dentition | 1.90e-10 | 6 |
subdivision of head | 3.10e-10 | 49 |
anterior segment of eyeball | 6.24e-10 | 14 |
skull | 4.39e-09 | 7 |
head | 6.43e-09 | 56 |
head connective tissue | 1.39e-08 | 2 |
substantia propria of cornea | 1.39e-08 | 2 |
anterior region of body | 5.04e-08 | 62 |
craniocervical region | 5.04e-08 | 62 |
camera-type eye | 4.16e-07 | 20 |
simple eye | 4.16e-07 | 20 |
immature eye | 4.16e-07 | 20 |
ocular region | 4.16e-07 | 20 |
eyeball of camera-type eye | 4.16e-07 | 20 |
optic cup | 4.16e-07 | 20 |
optic vesicle | 4.16e-07 | 20 |
eye primordium | 4.16e-07 | 20 |
eye | 8.60e-07 | 21 |
visual system | 8.60e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
anemia | 6.44e-16 | 1 |
hematopoietic system disease | 1.29e-08 | 2 |