FFCP PHASE1:Hg19::chr12:25055065..25055076,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:25055065..25055076,-
|short_description=p16@BCAT1
|description=CAGE_peak_16_at_BCAT1_5end
|association_with_transcript=153bp_to_ENST00000538118_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=586 | |EntrezGene=586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |HGNC=976 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DQ7 | |UniProt=Q68DQ7 | ||
|association_with_transcript=153bp_to_ENST00000538118_5end | |||
|cluster_id=chr12:25055065..25055076,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_16_at_BCAT1_5end | |||
|id=chr12:25055065..25055076,- | |||
|ontology_enrichment_celltype=CL:0002139!4.02e-21!24;CL:0000071!1.24e-17!18;CL:0002546!1.24e-17!18;CL:0000115!2.25e-14!35;CL:0002078!2.82e-10!44;CL:0002543!5.51e-08!6;CL:0002144!5.82e-07!3;CL:0000213!9.37e-07!57;CL:0000215!9.37e-07!57;CL:1000413!9.98e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002144;3.58e-28;3!CL:0002139;4.29e-23;24!CL:0000039;1.36e-21;7!CL:0000586;1.36e-21;7!CL:0000047;6.51e-19;2!CL:0000071;9.76e-18;18!CL:0000115;2.52e-11;36!CL:0002078;2.04e-09;45!CL:0000213;3.53e-07;58!CL:0000215;3.53e-07;58!CL:0002543;6.67e-07;6!CL:0002138;6.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.06e-28,3;CL:0002139,3.71e-23,24;CL:0000039,1.02e-21,7;CL:0000586,1.02e-21,7;CL:0000071,5.90e-18,18;CL:0002546,5.90e-18,18;CL:0000115,4.01e-15,36;CL:0002078,6.66e-12,45;CL:0000213,5.19e-09,58;CL:0000215,5.19e-09,58;CL:0002543,5.42e-07,6;CL:0005020,9.53e-07,6;CL:0002138,9.53e-07,6;CL:0005022,9.53e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;9.76e-18;18!UBERON:0009117;3.42e-15;10!UBERON:0005564;3.42e-15;10!UBERON:0006222;2.50e-10;1!CL:0005022;6.67e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.50e-10;1!DOID:3095;5.47e-07;22!DOID:2994;5.47e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.89e-10,1;DOID:3095,5.01e-07,22;DOID:2994,5.01e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.29e-30!86;UBERON:0000073!9.91e-29!94;UBERON:0001016!9.91e-29!94;UBERON:0001017!1.05e-25!82;UBERON:0003075!4.10e-24!86;UBERON:0007284!4.10e-24!86;UBERON:0002346!1.79e-22!90;UBERON:0001049!7.54e-22!57;UBERON:0005068!7.54e-22!57;UBERON:0006241!7.54e-22!57;UBERON:0007135!7.54e-22!57;UBERON:0000955!8.89e-20!69;UBERON:0006238!8.89e-20!69;UBERON:0002616!2.97e-19!59;UBERON:0003056!4.66e-18!61;UBERON:0001986!1.24e-17!18;UBERON:0004638!1.24e-17!18;UBERON:0004852!1.24e-17!18;UBERON:0000033!1.41e-16!123;UBERON:0004121!7.92e-16!169;UBERON:0002020!2.09e-15!34;UBERON:0003528!2.09e-15!34;UBERON:0000153!3.30e-15!129;UBERON:0007811!3.30e-15!129;UBERON:0000924!4.10e-15!173;UBERON:0006601!4.10e-15!173;UBERON:0001893!4.59e-15!34;UBERON:0002780!1.59e-14!41;UBERON:0001890!1.59e-14!41;UBERON:0006240!1.59e-14!41;UBERON:0002791!4.28e-14!33;UBERON:0003080!4.91e-14!42;UBERON:0000487!1.18e-13!22;UBERON:0001869!3.47e-13!32;UBERON:0000119!4.10e-12!312;UBERON:0000483!6.74e-12!309;UBERON:0000025!8.79e-12!194;UBERON:0006914!1.60e-11!25;UBERON:0002298!9.54e-10!8;UBERON:0004111!1.56e-09!241;UBERON:0003076!2.03e-09!15;UBERON:0003057!2.03e-09!15;UBERON:0000956!3.81e-09!25;UBERON:0000203!3.81e-09!25;UBERON:0007023!5.97e-09!115;UBERON:0000468!1.23e-08!659;UBERON:0002308!1.65e-08!9;UBERON:0000125!1.65e-08!9;UBERON:0000922!3.65e-08!612;UBERON:0007625!4.85e-08!11;UBERON:0000467!5.33e-08!625;UBERON:0000480!6.08e-08!626;UBERON:0004733!8.83e-08!12;UBERON:0002028!8.83e-08!12;UBERON:0007277!8.83e-08!12;UBERON:0002619!1.24e-07!22;UBERON:0000477!1.55e-07!286;UBERON:0001950!2.80e-07!20;UBERON:0004732!4.63e-07!13;UBERON:0001915!5.82e-07!3;UBERON:0001982!5.82e-07!3;UBERON:0003915!9.98e-07!9;UBERON:0004700!9.98e-07!9;UBERON:0001917!9.98e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;3.58e-28;3!UBERON:0001915;3.58e-28;3!UBERON:0001982;3.58e-28;3!UBERON:0000473;6.27e-19;8!UBERON:0004638;9.76e-18;18!UBERON:0001986;9.76e-18;18!UBERON:0004852;9.76e-18;18!UBERON:0000487;1.93e-14;22!UBERON:0003135;7.86e-14;11!UBERON:0006914;1.17e-12;25!UBERON:0005795;1.08e-10;1!UBERON:0000966;2.68e-08;5!UBERON:0005388;2.68e-08;5!UBERON:0001802;2.68e-08;5!UBERON:0000490;6.17e-08;33!UBERON:0000991;2.57e-07;21!UBERON:0003101;5.47e-07;22!UBERON:0000079;5.47e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.06e-28,3;UBERON:0001915,2.06e-28,3;UBERON:0001982,2.06e-28,3;UBERON:0000473,4.89e-19,8;UBERON:0004638,5.90e-18,18;UBERON:0001986,5.90e-18,18;UBERON:0004852,5.90e-18,18;UBERON:0000487,1.28e-14,22;UBERON:0003135,6.57e-14,11;UBERON:0006914,8.19e-13,25;UBERON:0000055,1.54e-07,68;UBERON:0000991,2.35e-07,21;UBERON:0009196,2.35e-07,21;UBERON:0009117,2.35e-07,21;UBERON:0005564,2.35e-07,21;UBERON:0000966,4.52e-07,6;UBERON:0005388,4.52e-07,6;UBERON:0001802,4.52e-07,6;UBERON:0004176,5.01e-07,22;UBERON:0003101,5.01e-07,22;UBERON:0000079,5.01e-07,22 | |||
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| ||
|short_description=p16@BCAT1 | |||
}} | }} |
Latest revision as of 21:57, 17 September 2015
Short description: | p16@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 153bp_to_ENST00000538118_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | Q68DQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.06e-28 | 3 |
endothelial cell of vascular tree | 3.71e-23 | 24 |
germ line cell | 1.02e-21 | 7 |
germ cell | 1.02e-21 | 7 |
blood vessel endothelial cell | 5.90e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.90e-18 | 18 |
endothelial cell | 4.01e-15 | 36 |
meso-epithelial cell | 6.66e-12 | 45 |
lining cell | 5.19e-09 | 58 |
barrier cell | 5.19e-09 | 58 |
vein endothelial cell | 5.42e-07 | 6 |
lymphangioblast | 9.53e-07 | 6 |
endothelial cell of lymphatic vessel | 9.53e-07 | 6 |
vascular lymphangioblast | 9.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.06e-28 | 3 |
endothelium of capillary | 2.06e-28 | 3 |
capillary | 2.06e-28 | 3 |
testis | 4.89e-19 | 8 |
blood vessel endothelium | 5.90e-18 | 18 |
endothelium | 5.90e-18 | 18 |
cardiovascular system endothelium | 5.90e-18 | 18 |
simple squamous epithelium | 1.28e-14 | 22 |
male reproductive organ | 6.57e-14 | 11 |
squamous epithelium | 8.19e-13 | 25 |
vessel | 1.54e-07 | 68 |
gonad | 2.35e-07 | 21 |
indifferent external genitalia | 2.35e-07 | 21 |
indifferent gonad | 2.35e-07 | 21 |
gonad primordium | 2.35e-07 | 21 |
retina | 4.52e-07 | 6 |
photoreceptor array | 4.52e-07 | 6 |
posterior segment of eyeball | 4.52e-07 | 6 |
external genitalia | 5.01e-07 | 22 |
male organism | 5.01e-07 | 22 |
male reproductive system | 5.01e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.89e-10 | 1 |
germ cell and embryonal cancer | 5.01e-07 | 22 |
germ cell cancer | 5.01e-07 | 22 |