FFCP PHASE1:Hg19::chr12:47472684..47472703,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:47472684..47472703,-
|short_description=p12@AMIGO2
|description=CAGE_peak_12_at_AMIGO2_5end
|association_with_transcript=81bp_to_AY237005_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=347902 | |EntrezGene=347902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24073 | |HGNC=24073 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SJ2 | |UniProt=Q86SJ2 | ||
|association_with_transcript=81bp_to_AY237005_5end | |||
|cluster_id=chr12:47472684..47472703,- | |||
|coexpression_cluster_id=C1169 | |||
|description=CAGE_peak_12_at_AMIGO2_5end | |||
|id=chr12:47472684..47472703,- | |||
|ontology_enrichment_celltype=CL:0000066!2.85e-10!254;CL:0000244!2.43e-07!4;CL:0000731!2.43e-07!4;CL:0002076!3.68e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.43e-32;4!CL:0000731;3.43e-32;4!CL:0002621;1.87e-11;3!CL:0002568;1.37e-09;1!CL:1001319;3.25e-09;1!CL:1000600;3.25e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.05e-32,4;CL:0000731,4.05e-32,4;CL:0002621,2.19e-11,3;CL:0002568,1.32e-09,1;CL:1001319,3.53e-09,1;CL:1000600,3.53e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.51e-09!14;DOID:14566!4.49e-08!239;DOID:120!1.32e-07!27;DOID:162!1.35e-07!235;DOID:305!6.85e-07!106;DOID:193!8.03e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:3571;3.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,5.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!9.72e-09!5;UBERON:0005910!3.89e-07!6;UBERON:0000466!5.31e-07!126;UBERON:0005911!6.00e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.23e-39;5!UBERON:0005910;4.90e-33;6!UBERON:0000486;1.41e-31;12!UBERON:0006554;4.55e-16;30!UBERON:0001008;4.55e-16;30!UBERON:0001949;1.87e-11;3!UBERON:0003350;2.02e-09;8!UBERON:0004645;3.25e-09;1!UBERON:0001256;3.25e-09;1!UBERON:0001259;3.25e-09;1!UBERON:0005911;4.25e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.58e-39,5;UBERON:0005910,6.02e-33,6;UBERON:0006554,1.73e-12,47;UBERON:0001008,3.36e-12,48;UBERON:0001949,2.19e-11,3;UBERON:0003350,2.27e-09,8;UBERON:0004645,3.53e-09,1;UBERON:0001256,3.53e-09,1;UBERON:0001259,3.53e-09,1;UBERON:0005911,4.43e-08,82 | |||
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| ||
|short_description=p12@AMIGO2 | |||
}} | }} |
Latest revision as of 12:05, 18 September 2015
Short description: | p12@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AMIGO2_5end |
Coexpression cluster: | C1169_Urothelial_meningioma_medulloblastoma_Prostate_fibrosarcoma_Anulus_Nucleus |
Association with transcript: | 81bp_to_AY237005_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | Q86SJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.05e-32 | 4 |
urothelial cell | 4.05e-32 | 4 |
gingival epithelial cell | 2.19e-11 | 3 |
mesenchymal stem cell of Wharton's jelly | 1.32e-09 | 1 |
bladder cell | 3.53e-09 | 1 |
lower urinary tract cell | 3.53e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.58e-39 | 5 |
transitional epithelium | 6.02e-33 | 6 |
urinary system structure | 1.73e-12 | 47 |
renal system | 3.36e-12 | 48 |
gingival epithelium | 2.19e-11 | 3 |
epithelium of mucosa | 2.27e-09 | 8 |
urinary bladder urothelium | 3.53e-09 | 1 |
wall of urinary bladder | 3.53e-09 | 1 |
mucosa of urinary bladder | 3.53e-09 | 1 |
endo-epithelium | 4.43e-08 | 82 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.72e-09 | 1 |