FFCP PHASE1:Hg19::chr12:54379477..54379498,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:54379477..54379498,+
|short_description=p5@HOXC5
|description=CAGE_peak_5_at_HOXC5_5end
|association_with_transcript=-130bp_to_ENST00000513209_5end
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3222 | |EntrezGene=3222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5127 | |HGNC=5127 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-130bp_to_ENST00000513209_5end | |||
|cluster_id=chr12:54379477..54379498,+ | |||
|description=CAGE_peak_5_at_HOXC5_5end | |||
|id=chr12:54379477..54379498,+ | |||
|ontology_enrichment_celltype=CL:0000153!3.18e-10!9;CL:0000447!3.18e-10!9;CL:0000499!1.62e-07!27;CL:0000667!3.28e-07!6;CL:0000058!3.28e-07!6;CL:0000138!3.28e-07!6;CL:0000035!5.50e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.00e-11;10!CL:0000147;4.50e-08;14!CL:0002567;6.35e-07;3!CL:0002178;6.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.39e-11,10;CL:0000541,1.39e-11,10;CL:0000066,1.19e-08,253;CL:0000147,3.50e-08,14;CL:0002567,5.31e-07,3;CL:0002178,7.83e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.94e-17;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.42e-13!143;DOID:305!7.24e-09!106;DOID:14566!2.02e-07!239;DOID:162!3.25e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.11e-12,106;DOID:0050687,1.46e-11,143;DOID:162,4.11e-07,235;DOID:14566,7.53e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.65e-13!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.73e-41;9!UBERON:0001557;1.73e-41;9!UBERON:0000072;3.35e-12;37!UBERON:0000065;2.59e-10;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.42e-41,9;UBERON:0001557,8.24e-19,19;UBERON:0008947,8.16e-13,38;UBERON:0003258,8.16e-13,38;UBERON:0000072,6.26e-10,47;UBERON:0000065,2.34e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31259040111563,4.38320194203064,4.33819853790268,3.41911315470421,2.83243277320128,2.84724742933316,2.02246962240247,3.92442930250692,3.46272441251751,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,1.20634766893957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,1.77794104018073,2.29193055334967,0,1.71072446022705,0.514137463516618,5.40617504119051,5.43070221998099,0,0,0,0.517086863031111,0,0.845302752556,0,0,0.514414748524284,0,0.532844358032199,0,1.08524321078289,0,0.65147236858747,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.355123450626254,0.164254312027618,0,0.581051892299796,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0.457847324091717,0.247528499761764,1.14853107599234,0.650060246036521,0,0.386682873168488,0,0,0.137836572484531,0.644521469209642,0.145016693914229,0.255679882248303,0.267096106940212,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,1.62328301570163,0.6196469961995,0.281695602532241,0.286822704408103,0.0982490410131212,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.606802608747567,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0.251932747854276,0,0,0,0,0,0,0,0,3.33410970433911,0,0,0,0,4.023159999825,0,0,0,2.36387681767936,0,0,0.173624994933292,0,0,0,0,0,0,3.48603083260768,1.25481369850743,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.853828638089378,0.277349346026277,0,0,0,0,0,1.74161396320353,2.11959019549938,2.05288642633023,0,0.529536760149002,0,0.137041924646751,0,0,1.75996244461323,0,0,0.19980960958213,2.4495370916198,0.80175617316141,0,0,0,0,0,0.104602846312333,1.01998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0.335434687599266,0.709251365692784,0.681909645754975,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,2.72008901684737,1.2534494701135,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0.468334905806882,0.869526171664951,0,0.467426619694449,0,1.51522404220071,0.754703705257725,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.491545817507439,0.633936370075881,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.509197589862076,0.637724760305049,1.23935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.353909170043221,0,0.346576998451015,0.381382095467167,0.690359926060101,0.596748666348824,0.225630985047772,0.40341013740704,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.703484977438482,0.255524855279191,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0.863710364874486,0,0,0,0.464965701472501,0.173858272302579,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0,0,0,1.07965256976767,0,0.647428837187895,0.615976841137482,1.1598144313382,0,0.233939463462106,0,0.237840181555137,0,0,0,0,0,0,0,2.35676547101626,0,0,0,0.679708458751268,0,0,0,0.357107877211315,0,0,0,0,0,1.57771562193185,0,0,0,1.11598505450025,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31259040111563,4.38320194203064,4.33819853790268,3.41911315470421,2.83243277320128,2.84724742933316,2.02246962240247,3.92442930250692,3.46272441251751,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,1.20634766893957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,1.77794104018073,2.29193055334967,0,1.71072446022705,0.514137463516618,5.40617504119051,5.43070221998099,0,0,0,0.517086863031111,0,0.845302752556,0,0,0.514414748524284,0,0.532844358032199,0,1.08524321078289,0,0.65147236858747,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.355123450626254,0.164254312027618,0,0.581051892299796,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0.457847324091717,0.247528499761764,1.14853107599234,0.650060246036521,0,0.386682873168488,0,0,0.137836572484531,0.644521469209642,0.145016693914229,0.255679882248303,0.267096106940212,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,1.62328301570163,0.6196469961995,0.281695602532241,0.286822704408103,0.0982490410131212,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.606802608747567,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0.251932747854276,0,0,0,0,0,0,0,0,3.33410970433911,0,0,0,0,4.023159999825,0,0,0,2.36387681767936,0,0,0.173624994933292,0,0,0,0,0,0,3.48603083260768,1.25481369850743,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.853828638089378,0.277349346026277,0,0,0,0,0,1.74161396320353,2.11959019549938,2.05288642633023,0,0.529536760149002,0,0.137041924646751,0,0,1.75996244461323,0,0,0.19980960958213,2.4495370916198,0.80175617316141,0,0,0,0,0,0.104602846312333,1.01998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0.335434687599266,0.709251365692784,0.681909645754975,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,2.72008901684737,1.2534494701135,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0.468334905806882,0.869526171664951,0,0.467426619694449,0,1.51522404220071,0.754703705257725,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.491545817507439,0.633936370075881,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.509197589862076,0.637724760305049,1.23935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.353909170043221,0,0.346576998451015,0.381382095467167,0.690359926060101,0.596748666348824,0.225630985047772,0.40341013740704,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.703484977438482,0.255524855279191,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0.863710364874486,0,0,0,0.464965701472501,0.173858272302579,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0,0,0,1.07965256976767,0,0.647428837187895,0.615976841137482,1.1598144313382,0,0.233939463462106,0,0.237840181555137,0,0,0,0,0,0,0,2.35676547101626,0,0,0,0.679708458751268,0,0,0,0.357107877211315,0,0,0,0,0,1.57771562193185,0,0,0,1.11598505450025,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@HOXC5 | |||
}} | }} |
Latest revision as of 04:34, 19 September 2015
Short description: | p5@HOXC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXC5_5end |
Coexpression cluster: | NA |
Association with transcript: | -130bp_to_ENST00000513209_5end |
EntrezGene: | HOXC5 |
HGNC: | 5127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.39e-11 | 10 |
melanoblast | 1.39e-11 | 10 |
epithelial cell | 1.19e-08 | 253 |
pigment cell | 3.50e-08 | 14 |
light melanocyte | 5.31e-07 | 3 |
epithelial cell of stomach | 7.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.42e-41 | 9 |
upper respiratory tract | 8.24e-19 | 19 |
respiratory primordium | 8.16e-13 | 38 |
endoderm of foregut | 8.16e-13 | 38 |
segment of respiratory tract | 6.26e-10 | 47 |
respiratory tract | 2.34e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.11e-12 | 106 |
cell type cancer | 1.46e-11 | 143 |
cancer | 4.11e-07 | 235 |
disease of cellular proliferation | 7.53e-07 | 239 |