FFCP PHASE1:Hg19::chr12:54794757..54794770,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:54794757..54794770,-
|short_description=p13@ITGA5
|description=CAGE_peak_13_at_ITGA5_5end
|association_with_transcript=-115bp_to_ENST00000552387_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3678 | |EntrezGene=3678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6141 | |HGNC=6141 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-115bp_to_ENST00000552387_5end | |||
|cluster_id=chr12:54794757..54794770,- | |||
|description=CAGE_peak_13_at_ITGA5_5end | |||
|id=chr12:54794757..54794770,- | |||
|ontology_enrichment_celltype=CL:0000055!2.13e-08!180;CL:0000057!1.20e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002262;3.52e-14;2!CL:1000398;3.52e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.36e-14,2;CL:1000398,2.36e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.18e-08;1!UBERON:0003124;6.18e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.11e-07!79;UBERON:0007798!2.11e-07!79;UBERON:0001981!6.16e-07!60;UBERON:0007500!6.16e-07!60;UBERON:0004537!6.16e-07!60;UBERON:0006965!6.16e-07!60;UBERON:0000055!8.44e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.52e-14;2!UBERON:0003497;3.52e-14;2!UBERON:0003909;3.52e-14;2!UBERON:0003835;3.52e-14;2!UBERON:0001280;9.36e-10;3!UBERON:0004647;9.36e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.36e-14,2;UBERON:0003497,2.36e-14,2;UBERON:0003909,2.36e-14,2;UBERON:0003835,2.36e-14,2;UBERON:0001280,7.18e-10,3;UBERON:0004647,7.18e-10,3;UBERON:0005171,7.18e-10,3 | |||
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| ||
|short_description=p13@ITGA5 | |||
}} | }} |
Latest revision as of 06:19, 19 September 2015
Short description: | p13@ITGA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ITGA5_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_ENST00000552387_5end |
EntrezGene: | ITGA5 |
HGNC: | 6141 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.36e-14 | 2 |
endothelial cell of hepatic sinusoid | 2.36e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.36e-14 | 2 |
abdomen blood vessel | 2.36e-14 | 2 |
sinusoid | 2.36e-14 | 2 |
abdominal segment blood vessel | 2.36e-14 | 2 |
liver parenchyma | 7.18e-10 | 3 |
liver lobule | 7.18e-10 | 3 |
hepatic duct | 7.18e-10 | 3 |