FFCP PHASE1:Hg19::chr12:58109637..58109675,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:58109637..58109675,+
|short_description=p4@OS9
|description=CAGE_peak_4_at_OS9_5end
|association_with_transcript=-84bp_to_ENST00000550699_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10956 | |EntrezGene=10956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16994 | |HGNC=16994 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-84bp_to_ENST00000550699_5end | |||
|cluster_id=chr12:58109637..58109675,+ | |||
|description=CAGE_peak_4_at_OS9_5end | |||
|id=chr12:58109637..58109675,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.75e-10!42;CL:0000557!9.48e-10!71;CL:0000766!9.52e-10!76;CL:0000839!2.11e-09!70;CL:0002009!5.98e-09!65;CL:0002194!1.13e-08!63;CL:0000576!1.13e-08!63;CL:0000040!1.13e-08!63;CL:0000559!1.13e-08!63;CL:0000860!1.18e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-12;33!CL:0002057;1.28e-12;33!CL:0000473;3.26e-12;39!CL:0000234;3.26e-12;39!CL:0000576;1.67e-08;48!CL:0000766;3.05e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.17e-14,72;CL:0000473,1.80e-13,48;CL:0000234,1.80e-13,48;CL:0000557,4.36e-13,67;CL:0000839,1.72e-12,66;CL:0002009,4.27e-12,61;CL:0002194,7.39e-12,59;CL:0000576,7.39e-12,59;CL:0000040,7.39e-12,59;CL:0000559,7.39e-12,59;CL:0000860,1.41e-11,42;CL:0002057,1.41e-11,42 | |||
|ontology_enrichment_development_v019=CL:0002057;9.16e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!7.57e-08!101;UBERON:0001434!7.57e-08!101;UBERON:0002405!1.55e-07!115;UBERON:0002371!1.64e-07!80;UBERON:0001474!3.39e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.09e-11,76;UBERON:0002405,7.09e-10,93;UBERON:0001474,2.18e-09,82;UBERON:0004765,1.10e-07,90;UBERON:0002193,1.75e-07,108;UBERON:0002390,2.58e-07,98;UBERON:0003061,2.58e-07,98;UBERON:0001434,5.01e-07,100;UBERON:0000926,5.32e-07,315;UBERON:0004120,5.32e-07,315;UBERON:0006603,5.32e-07,315 | |||
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| ||
|short_description=p4@OS9 | |||
}} | }} |
Latest revision as of 15:55, 19 September 2015
Short description: | p4@OS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OS9_5end |
Coexpression cluster: | NA |
Association with transcript: | -84bp_to_ENST00000550699_5end |
EntrezGene: | OS9 |
HGNC: | 16994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.17e-14 | 72 |
defensive cell | 1.80e-13 | 48 |
phagocyte | 1.80e-13 | 48 |
granulocyte monocyte progenitor cell | 4.36e-13 | 67 |
myeloid lineage restricted progenitor cell | 1.72e-12 | 66 |
macrophage dendritic cell progenitor | 4.27e-12 | 61 |
monopoietic cell | 7.39e-12 | 59 |
monocyte | 7.39e-12 | 59 |
monoblast | 7.39e-12 | 59 |
promonocyte | 7.39e-12 | 59 |
classical monocyte | 1.41e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-11 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.09e-11 | 76 |
immune system | 7.09e-10 | 93 |
bone element | 2.18e-09 | 82 |
skeletal element | 1.10e-07 | 90 |
hemolymphoid system | 1.75e-07 | 108 |
hematopoietic system | 2.58e-07 | 98 |
blood island | 2.58e-07 | 98 |
skeletal system | 5.01e-07 | 100 |
mesoderm | 5.32e-07 | 315 |
mesoderm-derived structure | 5.32e-07 | 315 |
presumptive mesoderm | 5.32e-07 | 315 |