FFCP PHASE1:Hg19::chr5:1138370..1138374,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:1138370..1138374,- | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr5:1138370..1138374,- | |description=CAGE_peak_at_chr5:1138370..1138374,- | ||
|id=chr5:1138370..1138374,- | |id=chr5:1138370..1138374,- | ||
|ontology_enrichment_celltype=CL:0002057!5.72e-53!42;CL:0000860!1.18e-48!45;CL:0002009!9.00e-43!65;CL:0000557!1.73e-42!71;CL:0002194!5.39e-42!63;CL:0000576!5.39e-42!63;CL:0000040!5.39e-42!63;CL:0000559!5.39e-42!63;CL:0000839!1.00e-40!70;CL:0000766!1.60e-34!76;CL:0002087!5.15e-29!119;CL:0002031!1.54e-28!124;CL:0000763!1.11e-27!112;CL:0000049!1.11e-27!112;CL:0000738!3.70e-26!140;CL:0000037!8.42e-23!172;CL:0000566!8.42e-23!172;CL:0002032!4.50e-22!165;CL:0000837!4.50e-22!165;CL:0000988!1.14e-20!182;CL:0002393!7.51e-14!9;CL:0002397!7.51e-14!9;CL:0002619!7.59e-07!3 | |ontology_enrichment_celltype=CL:0002057!5.72e-53!42;CL:0000860!1.18e-48!45;CL:0002009!9.00e-43!65;CL:0000557!1.73e-42!71;CL:0002194!5.39e-42!63;CL:0000576!5.39e-42!63;CL:0000040!5.39e-42!63;CL:0000559!5.39e-42!63;CL:0000839!1.00e-40!70;CL:0000766!1.60e-34!76;CL:0002087!5.15e-29!119;CL:0002031!1.54e-28!124;CL:0000763!1.11e-27!112;CL:0000049!1.11e-27!112;CL:0000738!3.70e-26!140;CL:0000037!8.42e-23!172;CL:0000566!8.42e-23!172;CL:0002032!4.50e-22!165;CL:0000837!4.50e-22!165;CL:0000988!1.14e-20!182;CL:0002393!7.51e-14!9;CL:0002397!7.51e-14!9;CL:0002619!7.59e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.41e-23;33!CL:0002057;2.41e-23;33!CL:0000576;4.17e-21;48!CL:0000473;2.33e-17;39!CL:0000234;2.33e-17;39!CL:0002393;1.35e-16;6!CL:0002397;1.35e-16;6!CL:0000766;1.24e-14;69!CL:0002032;1.47e-11;1!CL:0000557;1.47e-11;1!CL:0002087;3.07e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.03e-34,42;CL:0002057,2.03e-34,42;CL:0000473,6.50e-30,48;CL:0000234,6.50e-30,48;CL:0000557,3.00e-28,67;CL:0002194,9.22e-28,59;CL:0000576,9.22e-28,59;CL:0000040,9.22e-28,59;CL:0000559,9.22e-28,59;CL:0002009,8.29e-27,61;CL:0000839,1.14e-24,66;CL:0000766,1.72e-22,72;CL:0000763,7.19e-17,108;CL:0000049,7.19e-17,108;CL:0002087,8.59e-16,115;CL:0002031,4.70e-15,120;CL:0000738,4.73e-13,136;CL:0002032,1.86e-12,161;CL:0000837,1.86e-12,161;CL:0000037,7.55e-12,168;CL:0002393,2.89e-11,9;CL:0002397,2.89e-11,9;CL:0000988,3.90e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.09e-36!80;UBERON:0001474!8.50e-33!86;UBERON:0002390!1.41e-31!102;UBERON:0003061!1.41e-31!102;UBERON:0002193!1.91e-30!112;UBERON:0002405!2.95e-30!115;UBERON:0004765!1.96e-27!101;UBERON:0001434!1.96e-27!101;UBERON:0002204!1.14e-11!167;UBERON:0003081!5.53e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.02e-24,76;UBERON:0001474,8.68e-23,82;UBERON:0004765,1.31e-20,90;UBERON:0002405,6.92e-20,93;UBERON:0002390,8.84e-19,98;UBERON:0003061,8.84e-19,98;UBERON:0001434,2.28e-18,100;UBERON:0002193,7.19e-17,108;UBERON:0002204,3.31e-10,167;UBERON:0003081,5.05e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,4.9859586767869,3.81034450193269,3.03815219002193,0.223915474239924,0.32389366601898,1.28787783817093,0.145398238779565,0,0.242584061187816,0.929716147622738,0.411167888021826,2.78735733805593,0.575384784644301,2.30544635876191,0.945928919554341,1.03423704220986,6.45484683583826,8.12558919566051,0.188242339542605,0.818718450173537,0.224723484445085,0.612167784741805,2.24650318953266,0.639337125799041,0.329851300186716,0,0.426224750532694,0.580418477257168,4.53908179752912,1.24564449799115,0.251248665256743,0,0.65156653411535,0,5.52416453981347,0.949387162322653,0,0.212604299965044,0.419317291016752,0.22465726229299,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,5.34928244531896,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25485129121739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0.078493092850514,0,2.24217730651031,0,0,0,0.428859265059938,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,2.0611549059201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.378893491091197,0.267964130156178,0,0.310298987585686,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr5:1138370..1138374,- | |short_description=p@chr5:1138370..1138374,- | ||
}} | }} |
Latest revision as of 08:49, 30 July 2015
Short description: | p@chr5:1138370..1138374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:1138370..1138374, - |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.03e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-34 | 42 |
defensive cell | 6.50e-30 | 48 |
phagocyte | 6.50e-30 | 48 |
granulocyte monocyte progenitor cell | 3.00e-28 | 67 |
monopoietic cell | 9.22e-28 | 59 |
monocyte | 9.22e-28 | 59 |
monoblast | 9.22e-28 | 59 |
promonocyte | 9.22e-28 | 59 |
macrophage dendritic cell progenitor | 8.29e-27 | 61 |
myeloid lineage restricted progenitor cell | 1.14e-24 | 66 |
myeloid leukocyte | 1.72e-22 | 72 |
myeloid cell | 7.19e-17 | 108 |
common myeloid progenitor | 7.19e-17 | 108 |
nongranular leukocyte | 8.59e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.70e-15 | 120 |
leukocyte | 4.73e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.86e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-12 | 161 |
hematopoietic stem cell | 7.55e-12 | 168 |
intermediate monocyte | 2.89e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.89e-11 | 9 |
hematopoietic cell | 3.90e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.02e-24 | 76 |
bone element | 8.68e-23 | 82 |
skeletal element | 1.31e-20 | 90 |
immune system | 6.92e-20 | 93 |
hematopoietic system | 8.84e-19 | 98 |
blood island | 8.84e-19 | 98 |
skeletal system | 2.28e-18 | 100 |
hemolymphoid system | 7.19e-17 | 108 |
musculoskeletal system | 3.31e-10 | 167 |
lateral plate mesoderm | 5.05e-08 | 203 |