FFCP PHASE1:Hg19::chr1:228604336..228604346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51127 | |EntrezGene=51127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13430 | |HGNC=13430 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000366698_5end | |association_with_transcript=0bp_to_ENST00000366698_5end | ||
|cluster_id=chr1:228604336..228604346,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_11_at_TRIM17_5end | |description=CAGE_peak_11_at_TRIM17_5end | ||
|id=chr1:228604336..228604346,- | |id=chr1:228604336..228604346,- | ||
|ontology_enrichment_celltype=CL:1000415!4.52e-11!2;CL:0000080!1.99e-08!6;CL:0000064!2.50e-07!3;CL:0005012!2.50e-07!3;CL:0000067!2.50e-07!3;CL:0002304!2.50e-07!3 | |ontology_enrichment_celltype=CL:1000415!4.52e-11!2;CL:0000080!1.99e-08!6;CL:0000064!2.50e-07!3;CL:0005012!2.50e-07!3;CL:0000067!2.50e-07!3;CL:0002304!2.50e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.12e-17;3!CL:0000149;1.29e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.12e-17,3;CL:0000149,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.35e-21;10!UBERON:0005564;7.35e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002110!1.17e-07!3;UBERON:0006242!1.17e-07!3;UBERON:0001778!2.50e-07!3;UBERON:0001775!2.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.21e-26;8!UBERON:0003135;4.48e-19;11!UBERON:0001781;1.12e-17;3!UBERON:0001782;1.12e-17;3!UBERON:0000966;3.60e-11;5!UBERON:0005388;3.60e-11;5!UBERON:0001802;3.60e-11;5!UBERON:0000991;1.57e-10;21!UBERON:0003101;4.23e-10;22!UBERON:0000079;4.23e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.81e-26,8;UBERON:0003135,4.69e-19,11;UBERON:0001782,1.12e-17,3;UBERON:0005424,1.12e-17,3;UBERON:0001781,1.29e-13,4;UBERON:0000991,1.61e-10,21;UBERON:0009196,1.61e-10,21;UBERON:0009117,1.61e-10,21;UBERON:0005564,1.61e-10,21;UBERON:0004176,4.33e-10,22;UBERON:0003101,4.33e-10,22;UBERON:0000079,4.33e-10,22;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6 | |||
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|short_description=p11@TRIM17 | |short_description=p11@TRIM17 | ||
}} | }} |
Latest revision as of 04:03, 16 September 2015
Short description: | p11@TRIM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TRIM17_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000366698_5end |
EntrezGene: | TRIM17 |
HGNC: | 13430 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.12e-17 | 3 |
visual pigment cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 9.81e-26 | 8 |
male reproductive organ | 4.69e-19 | 11 |
pigmented layer of retina | 1.12e-17 | 3 |
presumptive retinal pigmented epithelium | 1.12e-17 | 3 |
layer of retina | 1.29e-13 | 4 |
gonad | 1.61e-10 | 21 |
indifferent external genitalia | 1.61e-10 | 21 |
indifferent gonad | 1.61e-10 | 21 |
gonad primordium | 1.61e-10 | 21 |
external genitalia | 4.33e-10 | 22 |
male organism | 4.33e-10 | 22 |
male reproductive system | 4.33e-10 | 22 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |