FFCP PHASE1:Hg19::chr1:34630978..34630987,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114784 | |EntrezGene=114784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19290 | |HGNC=19290 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUA6,Q53TY4 | |UniProt=E7EUA6,Q53TY4 | ||
|association_with_transcript=-103bp_to_ENST00000373381,uc001bxm.1_5end | |association_with_transcript=-103bp_to_ENST00000373381,uc001bxm.1_5end | ||
|cluster_id=chr1:34630978..34630987,- | |||
|coexpression_cluster_id=C1856 | |||
|description=CAGE_peak_5_at_CSMD2_5end | |description=CAGE_peak_5_at_CSMD2_5end | ||
|id=chr1:34630978..34630987,- | |id=chr1:34630978..34630987,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.42e-15;3!CL:1000428;1.42e-15;3!CL:0002559;1.01e-09;5!CL:0000047;8.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.32e-15,3;CL:1000428,1.32e-15,3;CL:0002559,9.70e-10,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.60e-12;1!DOID:3149;2.60e-12;1!DOID:3451;8.76e-07;2!DOID:4159;8.76e-07;2!DOID:0060122;8.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.81e-12,1;DOID:3149,4.81e-12,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000412;1.42e-15;3!UBERON:0001992;1.42e-15;3!UBERON:0002073;1.01e-09;5!UBERON:0002619;4.60e-08;22!UBERON:0000956;3.76e-07;25!UBERON:0000203;3.76e-07;25!UBERON:0000922;5.27e-07;49!UBERON:0001954;8.76e-07;2!UBERON:0003022;8.76e-07;2!UBERON:0002421;8.76e-07;2!UBERON:0002600;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.32e-15,3;UBERON:0001992,1.32e-15,3;UBERON:0002073,9.70e-10,5;UBERON:0005086,9.70e-10,5;UBERON:0002619,4.73e-08,22;UBERON:0000956,3.86e-07,25;UBERON:0000203,3.86e-07,25;UBERON:0001954,9.54e-07,2;UBERON:0003022,9.54e-07,2;UBERON:0002421,9.54e-07,2;UBERON:0002600,9.54e-07,2 | |||
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|short_description=p5@CSMD2 | |short_description=p5@CSMD2 | ||
}} | }} |
Latest revision as of 17:38, 17 September 2015
Short description: | p5@CSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CSMD2_5end |
Coexpression cluster: | C1856_brain_parietal_temporal_occipital_duodenum_Fibroblast_neuroectodermal |
Association with transcript: | -103bp_to_ENST00000373381, uc001bxm.1_5end |
EntrezGene: | CSMD2 |
HGNC: | 19290 |
UniProt: | E7EUA6Q53TY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.32e-15 | 3 |
stem cell of epidermis | 1.32e-15 | 3 |
hair follicle cell | 9.70e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.32e-15 | 3 |
papillary layer of dermis | 1.32e-15 | 3 |
hair follicle | 9.70e-10 | 5 |
hair follicle placode | 9.70e-10 | 5 |
regional part of cerebral cortex | 4.73e-08 | 22 |
cerebral cortex | 3.86e-07 | 25 |
pallium | 3.86e-07 | 25 |
Ammon's horn | 9.54e-07 | 2 |
lobe parts of cerebral cortex | 9.54e-07 | 2 |
hippocampal formation | 9.54e-07 | 2 |
limbic lobe | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.81e-12 | 1 |
keratoacanthoma | 4.81e-12 | 1 |