FFCP PHASE1:Hg19::chr6:31430954..31430968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10866 | |EntrezGene=10866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=21659 | |HGNC=21659 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460889,ENST00000467369,ENST00000541196,NR_040662,uc003ntl.2_5end | |association_with_transcript=0bp_to_ENST00000460889,ENST00000467369,ENST00000541196,NR_040662,uc003ntl.2_5end | ||
|cluster_id=chr6:31430954..31430968,+ | |||
|coexpression_cluster_id=C4586 | |||
|description=CAGE_peak_1_at_HCP5_5end | |description=CAGE_peak_1_at_HCP5_5end | ||
|id=chr6:31430954..31430968,+ | |id=chr6:31430954..31430968,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.96e-45!140;CL:0002087!4.67e-40!119;CL:0002031!1.32e-36!124;CL:0000037!1.59e-27!172;CL:0000566!1.59e-27!172;CL:0000988!3.70e-26!182;CL:0002032!4.63e-26!165;CL:0000837!4.63e-26!165;CL:0000860!1.16e-22!45;CL:0002057!1.54e-22!42;CL:0000766!1.54e-21!76;CL:0002009!1.10e-19!65;CL:0000542!2.43e-19!53;CL:0000051!2.43e-19!53;CL:0000838!3.82e-19!52;CL:0002194!8.54e-19!63;CL:0000576!8.54e-19!63;CL:0000040!8.54e-19!63;CL:0000559!8.54e-19!63;CL:0000557!5.85e-18!71;CL:0000839!2.34e-16!70;CL:0000791!9.44e-11!18;CL:0000789!9.44e-11!18;CL:0002420!9.44e-11!18;CL:0002419!9.44e-11!18;CL:0000790!9.44e-11!18;CL:0000945!1.07e-10!24;CL:0000826!1.07e-10!24;CL:0000763!1.44e-09!112;CL:0000049!1.44e-09!112;CL:0000084!4.85e-08!25;CL:0000827!4.85e-08!25;CL:0000625!1.06e-07!11;CL:0000236!1.70e-07!14 | |ontology_enrichment_celltype=CL:0000738!1.96e-45!140;CL:0002087!4.67e-40!119;CL:0002031!1.32e-36!124;CL:0000037!1.59e-27!172;CL:0000566!1.59e-27!172;CL:0000988!3.70e-26!182;CL:0002032!4.63e-26!165;CL:0000837!4.63e-26!165;CL:0000860!1.16e-22!45;CL:0002057!1.54e-22!42;CL:0000766!1.54e-21!76;CL:0002009!1.10e-19!65;CL:0000542!2.43e-19!53;CL:0000051!2.43e-19!53;CL:0000838!3.82e-19!52;CL:0002194!8.54e-19!63;CL:0000576!8.54e-19!63;CL:0000040!8.54e-19!63;CL:0000559!8.54e-19!63;CL:0000557!5.85e-18!71;CL:0000839!2.34e-16!70;CL:0000791!9.44e-11!18;CL:0000789!9.44e-11!18;CL:0002420!9.44e-11!18;CL:0002419!9.44e-11!18;CL:0000790!9.44e-11!18;CL:0000945!1.07e-10!24;CL:0000826!1.07e-10!24;CL:0000763!1.44e-09!112;CL:0000049!1.44e-09!112;CL:0000084!4.85e-08!25;CL:0000827!4.85e-08!25;CL:0000625!1.06e-07!11;CL:0000236!1.70e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-18;33!CL:0002057;1.30e-18;33!CL:0000473;1.49e-15;39!CL:0000234;1.49e-15;39!CL:0000576;2.81e-14;48!CL:0002087;4.35e-14;104!CL:0000542;3.31e-12;53!CL:0000791;2.04e-11;18!CL:0000789;2.04e-11;18!CL:0002419;2.04e-11;18!CL:0000945;2.28e-11;24!CL:0000766;2.66e-10;69!CL:0000738;3.15e-10;136!CL:0000084;1.65e-08;25!CL:0000625;3.73e-08;11!CL:0000236;1.67e-07;13!CL:0000094;8.23e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.23e-49,136;CL:0002087,6.17e-44,115;CL:0002031,1.47e-39,120;CL:0000037,2.21e-31,168;CL:0000988,4.00e-30,177;CL:0002032,1.25e-29,161;CL:0000837,1.25e-29,161;CL:0000860,4.71e-24,42;CL:0002057,4.71e-24,42;CL:0000766,9.48e-24,72;CL:0000473,1.60e-23,48;CL:0000234,1.60e-23,48;CL:0002009,4.83e-22,61;CL:0002194,4.52e-21,59;CL:0000576,4.52e-21,59;CL:0000040,4.52e-21,59;CL:0000559,4.52e-21,59;CL:0000542,1.29e-20,53;CL:0000051,1.29e-20,53;CL:0000838,2.10e-20,52;CL:0000557,8.26e-20,67;CL:0000839,9.29e-18,66;CL:0000791,2.06e-11,18;CL:0000789,2.06e-11,18;CL:0002420,2.06e-11,18;CL:0002419,2.06e-11,18;CL:0000790,2.06e-11,18;CL:0000945,2.35e-11,24;CL:0000826,2.35e-11,24;CL:0000763,2.58e-11,108;CL:0000049,2.58e-11,108;CL:0000084,1.68e-08,25;CL:0000827,1.68e-08,25;CL:0000625,3.82e-08,11;CL:0000236,6.32e-08,14;CL:0000094,8.27e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-17;42!CL:0000051;3.31e-12;53!CL:0000790;2.04e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.77e-25!102;UBERON:0003061!2.77e-25!102;UBERON:0002193!7.86e-24!112;UBERON:0002371!1.59e-15!80;UBERON:0002405!3.00e-13!115;UBERON:0001474!3.07e-13!86;UBERON:0007023!4.75e-13!115;UBERON:0000178!2.61e-09!15;UBERON:0000179!2.61e-09!15;UBERON:0000463!2.61e-09!15;UBERON:0004765!5.68e-09!101;UBERON:0001434!5.68e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.00e-10;15!UBERON:0000179;7.00e-10;15!UBERON:0000463;7.00e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.80e-28,98;UBERON:0003061,7.80e-28,98;UBERON:0002193,1.08e-25,108;UBERON:0002405,5.06e-18,93;UBERON:0002371,3.51e-17,76;UBERON:0001474,7.01e-15,82;UBERON:0007023,1.30e-12,114;UBERON:0004765,8.69e-12,90;UBERON:0000178,7.21e-10,15;UBERON:0000179,7.21e-10,15;UBERON:0000463,7.21e-10,15;UBERON:0001434,6.36e-09,100 | |||
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| ||
|short_description=p1@HCP5 | |short_description=p1@HCP5 | ||
}} | }} |
Latest revision as of 20:30, 17 September 2015
Short description: | p1@HCP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCP5_5end |
Coexpression cluster: | C4586_Eosinophils_CD14_myeloma_renal_CD4_smallcell_Neutrophils |
Association with transcript: | 0bp_to_ENST00000460889, ENST00000467369, ENST00000541196, NR_040662, uc003ntl.2_5end |
EntrezGene: | HCP5 |
HGNC: | 21659 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.80e-28 | 98 |
blood island | 7.80e-28 | 98 |
hemolymphoid system | 1.08e-25 | 108 |
immune system | 5.06e-18 | 93 |
bone marrow | 3.51e-17 | 76 |
bone element | 7.01e-15 | 82 |
adult organism | 1.30e-12 | 114 |
skeletal element | 8.69e-12 | 90 |
blood | 7.21e-10 | 15 |
haemolymphatic fluid | 7.21e-10 | 15 |
organism substance | 7.21e-10 | 15 |
skeletal system | 6.36e-09 | 100 |