FFCP PHASE1:Hg19::chr20:44574407..44574431,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:44574407..44574431,+ | |||
|description=CAGE_peak_at_chr20:44574407..44574431,+ | |description=CAGE_peak_at_chr20:44574407..44574431,+ | ||
|id=chr20:44574407..44574431,+ | |id=chr20:44574407..44574431,+ | ||
|ontology_enrichment_celltype=CL:0000839!2.23e-17!70;CL:0000557!7.08e-17!71;CL:0002009!9.93e-17!65;CL:0002194!1.09e-16!63;CL:0000576!1.09e-16!63;CL:0000040!1.09e-16!63;CL:0000559!1.09e-16!63;CL:0000766!7.20e-14!76;CL:0000860!1.66e-13!45;CL:0002031!2.00e-13!124;CL:0002057!5.87e-13!42;CL:0000763!1.28e-12!112;CL:0000049!1.28e-12!112;CL:0002087!1.50e-12!119;CL:0000738!1.50e-11!140;CL:0000037!2.48e-11!172;CL:0000566!2.48e-11!172;CL:0002032!4.76e-11!165;CL:0000837!4.76e-11!165;CL:0000988!5.83e-10!182 | |ontology_enrichment_celltype=CL:0000839!2.23e-17!70;CL:0000557!7.08e-17!71;CL:0002009!9.93e-17!65;CL:0002194!1.09e-16!63;CL:0000576!1.09e-16!63;CL:0000040!1.09e-16!63;CL:0000559!1.09e-16!63;CL:0000766!7.20e-14!76;CL:0000860!1.66e-13!45;CL:0002031!2.00e-13!124;CL:0002057!5.87e-13!42;CL:0000763!1.28e-12!112;CL:0000049!1.28e-12!112;CL:0002087!1.50e-12!119;CL:0000738!1.50e-11!140;CL:0000037!2.48e-11!172;CL:0000566!2.48e-11!172;CL:0002032!4.76e-11!165;CL:0000837!4.76e-11!165;CL:0000988!5.83e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000875;6.16e-13;3!CL:0002396;6.16e-13;3!CL:0002127;7.39e-11;1!CL:0000911;7.39e-11;1!CL:0000814;7.39e-11;1!CL:0002537;2.99e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,4.84e-13,3;CL:0002396,4.84e-13,3;CL:0002127,7.40e-11,1;CL:0000914,7.40e-11,1;CL:0000911,7.40e-11,1;CL:0000814,7.40e-11,1;CL:0002042,7.40e-11,1;CL:0002039,7.40e-11,1;CL:0002040,7.40e-11,1;CL:0002041,7.40e-11,1;CL:0002393,1.33e-09,9;CL:0002397,1.33e-09,9;CL:0002032,1.02e-08,161;CL:0000837,1.02e-08,161;CL:0000763,2.16e-08,108;CL:0000049,2.16e-08,108;CL:0000037,2.94e-08,168;CL:0002537,3.40e-08,5;CL:0000988,1.01e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;8.29e-11;39!DOID:8692;5.60e-10;31!DOID:2531;9.68e-09;51!DOID:0060083;9.68e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.43e-14,39;DOID:2531,2.29e-13,51;DOID:0060083,2.29e-13,51;DOID:8692,2.73e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.57e-18!102;UBERON:0003061!1.57e-18!102;UBERON:0002193!2.40e-16!112;UBERON:0002371!3.01e-13!80;UBERON:0001474!3.03e-12!86;UBERON:0002405!1.64e-10!115;UBERON:0004765!2.12e-09!101;UBERON:0001434!2.12e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!1.57e-18!102;UBERON:0003061!1.57e-18!102;UBERON:0002193!2.40e-16!112;UBERON:0002371!3.01e-13!80;UBERON:0001474!3.03e-12!86;UBERON:0002405!1.64e-10!115;UBERON:0004765!2.12e-09!101;UBERON:0001434!2.12e-09!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.18e-07,98;UBERON:0003061,1.18e-07,98;UBERON:0002193,8.18e-07,108 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,1.39560233594486,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0.872389432677388,0,0.485168122375632,0.697287110717054,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0,0,1.31769637679823,0.272906150057846,1.34834090667051,0.918251677112708,0,0.639337125799041,0.989553900560148,0,0.426224750532694,0.870627715885752,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.633765858935825,1.27562579979026,0.419317291016752,0,0.150176892841506,0.16072558669708,1.42506371870624,0.39783335439818,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,16.1402607350679,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.714695326373367,0,1.29694662238543,0.540031437238115,0.79312517629427,0.320472213382419,0,0,0,0.28853842595289,0,0,0,0,0,0.324621940274555,0,0,2.0368386450493,0,0.169291777801603,0.1605880751037,0.201799707191048,0.851692475380653,0,0.614481528616916,1.56573275524691,1.66849141711908,20.1249738264102,7.2385605212763,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0,2.15012491469462,0.994147647766298,0.140669416410513,0,12.5250944412337,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0,0,0.638002319463839,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0.995261931078505,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.219267951258557,0.246346371159628,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0,0.288180834308212,0,0,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0.531459361253452,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0.115525666150338,0,0,3.97832444232549,0.300841313397029,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0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|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,1.39560233594486,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0.872389432677388,0,0.485168122375632,0.697287110717054,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0,0,1.31769637679823,0.272906150057846,1.34834090667051,0.918251677112708,0,0.639337125799041,0.989553900560148,0,0.426224750532694,0.870627715885752,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.633765858935825,1.27562579979026,0.419317291016752,0,0.150176892841506,0.16072558669708,1.42506371870624,0.39783335439818,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,16.1402607350679,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.714695326373367,0,1.29694662238543,0.540031437238115,0.79312517629427,0.320472213382419,0,0,0,0.28853842595289,0,0,0,0,0,0.324621940274555,0,0,2.0368386450493,0,0.169291777801603,0.1605880751037,0.201799707191048,0.851692475380653,0,0.614481528616916,1.56573275524691,1.66849141711908,20.1249738264102,7.2385605212763,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0,2.15012491469462,0.994147647766298,0.140669416410513,0,12.5250944412337,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0,0,0.638002319463839,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0.995261931078505,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.219267951258557,0.246346371159628,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0,0.288180834308212,0,0,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0.531459361253452,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0.115525666150338,0,0,3.97832444232549,0.300841313397029,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0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| ||
|short_description=p@chr20:44574407..44574431,+ | |short_description=p@chr20:44574407..44574431,+ | ||
}} | }} |
Latest revision as of 14:35, 28 July 2015
Short description: | p@chr20:44574407..44574431, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44574407..44574431, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 4.84e-13 | 3 |
CD14-low, CD16-positive monocyte | 4.84e-13 | 3 |
innate effector T cell | 7.40e-11 | 1 |
immature NK T cell | 7.40e-11 | 1 |
effector T cell | 7.40e-11 | 1 |
mature NK T cell | 7.40e-11 | 1 |
immature NK T cell stage IV | 7.40e-11 | 1 |
immature NK T cell stage I | 7.40e-11 | 1 |
immature NK T cell stage II | 7.40e-11 | 1 |
immature NK T cell stage III | 7.40e-11 | 1 |
intermediate monocyte | 1.33e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.33e-09 | 9 |
hematopoietic oligopotent progenitor cell | 1.02e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-08 | 161 |
myeloid cell | 2.16e-08 | 108 |
common myeloid progenitor | 2.16e-08 | 108 |
hematopoietic stem cell | 2.94e-08 | 168 |
amnion mesenchymal stem cell | 3.40e-08 | 5 |
hematopoietic cell | 1.01e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.18e-07 | 98 |
blood island | 1.18e-07 | 98 |
hemolymphoid system | 8.18e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.43e-14 | 39 |
hematologic cancer | 2.29e-13 | 51 |
immune system cancer | 2.29e-13 | 51 |
myeloid leukemia | 2.73e-10 | 31 |