FFCP PHASE1:Hg19::chr20:6103859..6103907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55612 | |EntrezGene=55612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |HGNC=15889 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1L6 | |UniProt=G3V1L6 | ||
|association_with_transcript=-182bp_to_ENST00000536936_5end | |association_with_transcript=-182bp_to_ENST00000536936_5end | ||
|cluster_id=chr20:6103859..6103907,- | |||
|coexpression_cluster_id=C1483 | |||
|description=CAGE_peak_2_at_FERMT1_5end | |description=CAGE_peak_2_at_FERMT1_5end | ||
|id=chr20:6103859..6103907,- | |id=chr20:6103859..6103907,- | ||
|ontology_enrichment_celltype=CL:0000066!1.98e-18!254;CL:0002076!1.14e-14!43;CL:0000223!8.88e-12!59;CL:0002368!2.29e-10!13;CL:0002321!2.50e-09!248;CL:0002251!6.30e-09!21;CL:0000220!6.40e-09!246;CL:0002202!2.60e-07!9;CL:0002632!2.60e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.98e-18!254;CL:0002076!1.14e-14!43;CL:0000223!8.88e-12!59;CL:0002368!2.29e-10!13;CL:0002321!2.50e-09!248;CL:0002251!6.30e-09!21;CL:0000220!6.40e-09!246;CL:0002202!2.60e-07!9;CL:0002632!2.60e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.80e-18;42!CL:0002368;5.57e-18;13!CL:0002159;1.15e-11;14!CL:0002202;1.29e-11;9!CL:0002632;1.29e-11;9!CL:0002251;3.22e-11;20!CL:0000622;1.03e-08;5!CL:0000244;1.03e-07;4!CL:0000731;1.03e-07;4!CL:0000154;3.68e-07;6!CL:0002077;5.32e-07;34!CL:0002621;7.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.36e-26,253;CL:0002076,4.33e-23,42;CL:0002368,7.03e-18,13;CL:0000223,5.16e-17,58;CL:0002159,1.15e-11,14;CL:0002202,1.62e-11,9;CL:0002632,1.62e-11,9;CL:0002251,2.52e-11,20;CL:0000622,1.16e-08,5;CL:0002321,5.02e-08,250;CL:0002077,6.19e-08,34;CL:0000244,1.02e-07,4;CL:0000731,1.02e-07,4;CL:0000154,4.06e-07,6;CL:0002621,7.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;7.75e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.64e-08!106;DOID:0050687!2.32e-08!143;DOID:1749!1.25e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.10e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.16e-10,14;DOID:305,1.73e-07,106;DOID:0050687,8.56e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.20e-11!169;UBERON:0000925!3.20e-11!169;UBERON:0006595!3.20e-11!169;UBERON:0001004!1.89e-09!72;UBERON:0000481!2.16e-09!347;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0000475!7.76e-08!365;UBERON:0003104!1.27e-07!238;UBERON:0009142!1.27e-07!238;UBERON:0000064!3.07e-07!219;UBERON:0000077!3.12e-07!130;UBERON:0000065!4.28e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!3.20e-11!169;UBERON:0000925!3.20e-11!169;UBERON:0006595!3.20e-11!169;UBERON:0001004!1.89e-09!72;UBERON:0000481!2.16e-09!347;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0000475!7.76e-08!365;UBERON:0003104!1.27e-07!238;UBERON:0009142!1.27e-07!238;UBERON:0000064!3.07e-07!219;UBERON:0000077!3.12e-07!130;UBERON:0000065!4.28e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.60e-09;5!UBERON:0000486;5.40e-09;12!UBERON:0007196;7.18e-08;15!UBERON:0001558;7.18e-08;15!UBERON:0005910;1.21e-07;6!UBERON:0005911;5.70e-07;36!UBERON:0001949;7.72e-07;3!UBERON:0000065;8.45e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.51e-12,74;UBERON:0004119,4.07e-10,160;UBERON:0000925,4.07e-10,160;UBERON:0006595,4.07e-10,160;UBERON:0000365,2.64e-09,5;UBERON:0000065,1.15e-08,54;UBERON:0003102,1.80e-08,99;UBERON:0007196,7.99e-08,15;UBERON:0001558,7.99e-08,15;UBERON:0005910,1.22e-07,6;UBERON:0001949,7.89e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0.737201809504527,0.697801167972428,6.11635841964482,5.27533956456907,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,0.369363174230364,0,0,0.286235987131057,0.410623275218653,0,1.37544130346312,0.985207073399349,0.865818594450472,0,0,0.154816123316076,19.3078457140575,20.482002476921,27.7315507625091,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,1.5905718941022,0,0.756278537312543,0.665188192387692,0.087834785693126,0.261958150995425,16.0289926848719,5.56176664176644,0,0.522389211897802,0.398873881556595,0,0,0,0.39752481473341,0,0,0,0,0,0.626984899610432,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,11.3384453557059,0,0.379891534993739,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,1.1409436430889,0,0,0,0,0,0.368502951935304,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.389748020644795,0,0,0,0,0.10075209822764,0,115.763251044815,45.2758560180785,58.5081374593568,0.731842236777572,0.662648841607426,0.232387885739037,0.518305275076852,1.00928340350251,0.72995471815166,0,0.643240938192885,0,0,0,0.591534000199219,1.34867752062481,1.20505514941741,1.65440959098591,0.653638332277218,1.89816495288877,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,58.9359032644319,21.3563331189477,106.962826645975,6.20342582562148,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,24.370796836562,18.8139983582723,27.0790435732958,72.1841692984957,44.1763586541222,41.0219466706776,0,0,0,0,0,0.507983154337352,0,0,5.13217338068116,0,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0.799266537048298,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0.343143423810856,0,0,0,0.606255142892519,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0.482561763430822,0,2.15893571323718,2.13074070375753,3.77784917663522,1.55776328755086,2.32420756919918,0.241718899183244,25.6648281988205,60.5892907198198,0.229628896329213,0.182091168006717,0.262248829918848,0.902399225814824,0.924184045252977,1.56869953835371,4.38417673959782,2.11103257785751,0,0,0.431831832204279,0,0.270946437543853,1.00337954770971,1.78413391131527,3.3243040357149,1.11937377361089,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,18.3764972158775,6.50060246036521,0,0.386682873168488,0.924291702687866,1.07452572308291,0.137836572484531,0.429680979473094,0.435050081742686,1.27839941124151,0.0890320356467374,29.7512847649761,30.5582207110519,21.6941611240793,14.9713515666214,1.85938219718914,0.31481234683064,2.7881490806424,0,1.06461206063404,0.869932992075073,0.37064843820784,0.429374660225974,0,0,0,0,0,0.318203247925937,0,0,0,0,1.2130948894399,0,0.842516912477962,0,0.974853958525138,1.05650146756755,0,0,1.13008116620243,2.75682671773062,0.66343897524122,0.438450885253763,0,0,0,0.6196469961995,0,0.430234056612155,0,0.35667105148125,0,0,0,0,0,48.6883890391091,10.7248364085726,13.0669181833587,0,18.9422363975341,13.47771805341,8.42517291719684,14.7022976132454,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0.270455678475983,0,0,0.37428108081644,0,0.121360521749513,0,2.55722532125772,3.58116727106535,0,0.614321404198464,0,0.140669416410513,0.222617410045812,0,12.2452736714236,0,0.828851746593443,0,0,0.861593638227486,0,1.88723537409386,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,2.61724931056649,1.01701460117107,0.236387681767936,0,0.291604613383254,0,0.885741385813839,0.60298219312704,0,0.110579259931225,0.295547618953547,0,0.32681539055697,2.09135616417905,0.923403102045565,0.113942055847001,0.23056390438806,0.807818799687949,1.08647371922008,0.638002319463839,0.641183153813036,0.533034776018635,0,0.470940769185074,0.166211681900156,0,0,0,0,0.476809736941136,0.210998064528027,0.489698424477443,0.141353071433941,0.216388639742091,0.995261931078505,0,0,0.593042257361244,1.23563938946503,2.50612678813093,0.943615861729479,0,1.1713222286267,0,0.782658475728359,2.18502341580683,0,0,0,0,0.150323419414493,0.103688191397247,19.9396161812156,13.23967823502,13.1851825731035,28.6733831455101,0,0,0,4.8016274733045,16.7153676634373,0,1.71986032471617,0.19351266257817,0.219267951258557,0.246346371159628,1.16386819786103,0,0,0.137041924646751,0,0.189932387867636,1.56441106187842,5.45079977710429,0.426905989478705,0.199809609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| ||
|short_description=p2@FERMT1 | |short_description=p2@FERMT1 | ||
}} | }} |
Latest revision as of 10:41, 17 September 2015
Short description: | p2@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FERMT1_5end |
Coexpression cluster: | C1483_Gingival_Keratinocyte_Mammary_Prostate_Tracheal_Small_embryonic |
Association with transcript: | -182bp_to_ENST00000536936_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | G3V1L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.36e-26 | 253 |
endo-epithelial cell | 4.33e-23 | 42 |
respiratory epithelial cell | 7.03e-18 | 13 |
endodermal cell | 5.16e-17 | 58 |
general ecto-epithelial cell | 1.15e-11 | 14 |
epithelial cell of tracheobronchial tree | 1.62e-11 | 9 |
epithelial cell of lower respiratory tract | 1.62e-11 | 9 |
epithelial cell of alimentary canal | 2.52e-11 | 20 |
acinar cell | 1.16e-08 | 5 |
embryonic cell | 5.02e-08 | 250 |
ecto-epithelial cell | 6.19e-08 | 34 |
transitional epithelial cell | 1.02e-07 | 4 |
urothelial cell | 1.02e-07 | 4 |
protein secreting cell | 4.06e-07 | 6 |
gingival epithelial cell | 7.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.51e-12 | 74 |
endoderm-derived structure | 4.07e-10 | 160 |
endoderm | 4.07e-10 | 160 |
presumptive endoderm | 4.07e-10 | 160 |
urothelium | 2.64e-09 | 5 |
respiratory tract | 1.15e-08 | 54 |
surface structure | 1.80e-08 | 99 |
tracheobronchial tree | 7.99e-08 | 15 |
lower respiratory tract | 7.99e-08 | 15 |
transitional epithelium | 1.22e-07 | 6 |
gingival epithelium | 7.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.16e-10 | 14 |
carcinoma | 1.73e-07 | 106 |
cell type cancer | 8.56e-07 | 143 |