FFCP PHASE1:Hg19::chr13:48806893..48806897,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:48806893..48806897,+
|short_description=p10@ITM2B
|description=CAGE_peak_10_at_ITM2B_5end
|association_with_transcript=-376bp_to_NM_021999,uc001vbz.3_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9445 | |EntrezGene=9445 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6174 | |HGNC=6174 | ||
|TSSclassifier=strong | |||
|UniProt=Q5W0A3,Q9Y287 | |UniProt=Q5W0A3,Q9Y287 | ||
|association_with_transcript=-376bp_to_NM_021999,uc001vbz.3_5end | |||
|cluster_id=chr13:48806893..48806897,+ | |||
|description=CAGE_peak_10_at_ITM2B_5end | |||
|id=chr13:48806893..48806897,+ | |||
|ontology_enrichment_celltype=CL:0002541!9.78e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.52e-22;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.47e-22,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.53e-16;1!UBERON:0008814;6.17e-09;2!UBERON:0010056;6.17e-09;2!UBERON:0006965;6.17e-09;2!UBERON:0007297;6.17e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.52e-17;1!DOID:3149;5.52e-17;1!DOID:3451;3.71e-09;2!DOID:4159;3.71e-09;2!DOID:0060122;3.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.72e-17,1;DOID:3149,4.72e-17,1;DOID:3451,3.43e-09,2;DOID:4159,3.43e-09,2;DOID:0060122,3.43e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.05e-32!115;UBERON:0003135!5.36e-09!11;UBERON:0006947!5.38e-08!3;UBERON:0004054!5.38e-08!3;UBERON:0000476!9.78e-08!3;UBERON:0000920!9.78e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.52e-22;3!UBERON:0000920;8.52e-22;3!UBERON:0006947;3.27e-21;3!UBERON:0004054;3.27e-21;3!UBERON:0001000;1.53e-16;1!UBERON:0001301;1.53e-16;1!UBERON:0005352;1.53e-16;1!UBERON:0005904;3.58e-16;4!UBERON:0005631;3.44e-07;10!UBERON:0000158;3.44e-07;10!UBERON:0004175;4.10e-07;21!UBERON:0000058;5.11e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.47e-22,3;UBERON:0006947,2.41e-21,3;UBERON:0004054,2.41e-21,3;UBERON:0001301,8.86e-17,1;UBERON:0001000,1.65e-16,1;UBERON:0005352,1.65e-16,1;UBERON:0005904,2.85e-16,4;UBERON:0007023,5.41e-10,114;UBERON:0003124,7.00e-10,7 | |||
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| ||
|short_description=p10@ITM2B | |||
}} | }} |
Latest revision as of 14:57, 17 September 2015
Short description: | p10@ITM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ITM2B_5end |
Coexpression cluster: | NA |
Association with transcript: | -376bp_to_NM_021999, uc001vbz.3_5end |
EntrezGene: | ITM2B |
HGNC: | 6174 |
UniProt: | Q5W0A3Q9Y287 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.47e-22 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.47e-22 | 3 |
male genital duct | 2.41e-21 | 3 |
internal male genitalia | 2.41e-21 | 3 |
epididymis | 8.86e-17 | 1 |
vas deferens | 1.65e-16 | 1 |
spermatic cord | 1.65e-16 | 1 |
duct of male reproductive system | 2.85e-16 | 4 |
adult organism | 5.41e-10 | 114 |
chorion | 7.00e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.72e-17 | 1 |
keratoacanthoma | 4.72e-17 | 1 |
skin carcinoma | 3.43e-09 | 2 |
skin cancer | 3.43e-09 | 2 |
integumentary system cancer | 3.43e-09 | 2 |