FFCP PHASE1:Hg19::chr14:21487105..21487122,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:21487105..21487122,-
|short_description=p35@NDRG2
|description=CAGE_peak_35_at_NDRG2_5end
|association_with_transcript=-132bp_to_ENST00000555650_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57447 | |EntrezGene=57447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14460 | |HGNC=14460 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-132bp_to_ENST00000555650_5end | |||
|cluster_id=chr14:21487105..21487122,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_35_at_NDRG2_5end | |||
|id=chr14:21487105..21487122,- | |||
|ontology_enrichment_celltype=CL:0000840!9.27e-31!5;CL:0001029!9.27e-31!5;CL:0000990!1.78e-20!8;CL:0000451!9.98e-17!10;CL:0001014!8.66e-16!2;CL:0001016!8.66e-16!2;CL:0002009!2.09e-11!65;CL:0000557!2.70e-10!71;CL:0002194!8.39e-08!63;CL:0000576!8.39e-08!63;CL:0000040!8.39e-08!63;CL:0000559!8.39e-08!63;CL:0000839!6.74e-07!70;CL:0000453!7.94e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.28e-81;5!CL:0000990;2.05e-54;8!CL:0000451;1.33e-44;10!CL:0001014;6.06e-40;2!CL:0001016;6.06e-40;2!CL:0000453;1.17e-16;5!CL:0000235;3.25e-14;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.93e-81,5;CL:0001029,1.93e-81,5;CL:0000990,1.84e-54,8;CL:0000451,1.22e-44,10;CL:0001014,5.49e-40,2;CL:0001016,5.49e-40,2;CL:0000453,1.12e-16,5;CL:0002009,2.27e-15,61;CL:0000235,3.48e-14,6;CL:0000557,5.35e-14,67;CL:0000763,1.23e-08,108;CL:0000049,1.23e-08,108;CL:0002194,2.27e-08,59;CL:0000576,2.27e-08,59;CL:0000040,2.27e-08,59;CL:0000559,2.27e-08,59;CL:0002031,9.55e-08,120;CL:0000839,1.68e-07,66;CL:0000766,6.91e-07,72;CL:0000738,8.43e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.88e-21;1!UBERON:0008801;3.45e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!4.45e-16!2;UBERON:0003127!6.14e-15!2;UBERON:0000078!5.02e-14!18;UBERON:0000166!5.97e-12!21;UBERON:0001044!6.32e-12!6;UBERON:0003293!6.32e-12!6;UBERON:0003294!6.32e-12!6;UBERON:0010047!6.32e-12!6;UBERON:0000167!6.32e-12!6;UBERON:0001723!2.27e-10!3;UBERON:0001033!2.27e-10!3;UBERON:0010056!2.27e-10!3;UBERON:0001736!6.03e-09!1;UBERON:0006298!6.03e-09!1;UBERON:0002371!6.16e-09!80;UBERON:0001831!7.56e-09!1;UBERON:0001567!7.56e-09!1;UBERON:0008801!7.56e-09!1;UBERON:0000165!7.83e-09!28;UBERON:0000930!7.83e-09!28;UBERON:0001474!3.45e-08!86;UBERON:0007190!3.79e-08!1;UBERON:0002372!4.07e-08!1;UBERON:0001961!4.07e-08!1;UBERON:0001744!4.07e-08!1;UBERON:0001735!4.07e-08!1;UBERON:0003408!2.47e-07!10;UBERON:0002193!4.83e-07!112;UBERON:0000161!5.86e-07!35;UBERON:0001042!8.28e-07!10;UBERON:0009145!8.28e-07!10;UBERON:0002405!8.34e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.98e-41;2!UBERON:0001044;1.13e-30;6!UBERON:0003293;1.13e-30;6!UBERON:0003294;1.13e-30;6!UBERON:0010047;1.13e-30;6!UBERON:0003408;1.13e-30;6!UBERON:0000167;1.13e-30;6!UBERON:0001736;1.88e-21;1!UBERON:0001831;3.45e-21;1!UBERON:0001567;3.45e-21;1!UBERON:0001041;1.41e-13;14!UBERON:0004089;2.73e-11;2!UBERON:0000161;3.57e-10;19!UBERON:0000166;3.57e-10;19!UBERON:0000165;4.35e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.98e-41,2;UBERON:0001044,1.13e-30,6;UBERON:0003293,1.13e-30,6;UBERON:0003294,1.13e-30,6;UBERON:0010047,1.13e-30,6;UBERON:0000167,1.13e-30,6;UBERON:0001736,1.88e-21,1;UBERON:0006298,1.88e-21,1;UBERON:0001831,3.45e-21,1;UBERON:0001567,3.45e-21,1;UBERON:0008801,3.45e-21,1;UBERON:0003408,1.01e-18,10;UBERON:0002371,2.45e-12,76;UBERON:0001474,1.99e-11,82;UBERON:0004089,2.73e-11,2;UBERON:0004765,2.12e-10,90;UBERON:0002405,4.64e-10,93;UBERON:0002390,1.54e-09,98;UBERON:0003061,1.54e-09,98;UBERON:0001434,2.42e-09,100;UBERON:0000166,7.21e-09,22;UBERON:0002193,1.23e-08,108;UBERON:0000165,7.32e-07,29;UBERON:0000930,7.32e-07,29 | |||
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|short_description=p35@NDRG2 | |||
}} | }} |
Latest revision as of 01:01, 19 September 2015
Short description: | p35@NDRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_NDRG2_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -132bp_to_ENST00000555650_5end |
EntrezGene: | NDRG2 |
HGNC: | 14460 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.93e-81 | 5 |
common dendritic progenitor | 1.93e-81 | 5 |
conventional dendritic cell | 1.84e-54 | 8 |
dendritic cell | 1.22e-44 | 10 |
CD1a-positive Langerhans cell | 5.49e-40 | 2 |
immature CD1a-positive Langerhans cell | 5.49e-40 | 2 |
Langerhans cell | 1.12e-16 | 5 |
macrophage dendritic cell progenitor | 2.27e-15 | 61 |
macrophage | 3.48e-14 | 6 |
granulocyte monocyte progenitor cell | 5.35e-14 | 67 |
myeloid cell | 1.23e-08 | 108 |
common myeloid progenitor | 1.23e-08 | 108 |
monopoietic cell | 2.27e-08 | 59 |
monocyte | 2.27e-08 | 59 |
monoblast | 2.27e-08 | 59 |
promonocyte | 2.27e-08 | 59 |
hematopoietic lineage restricted progenitor cell | 9.55e-08 | 120 |
myeloid lineage restricted progenitor cell | 1.68e-07 | 66 |
myeloid leukocyte | 6.91e-07 | 72 |
leukocyte | 8.43e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.98e-41 | 2 |
saliva-secreting gland | 1.13e-30 | 6 |
gland of oral region | 1.13e-30 | 6 |
gland of foregut | 1.13e-30 | 6 |
oral gland | 1.13e-30 | 6 |
oral cavity | 1.13e-30 | 6 |
submandibular gland | 1.88e-21 | 1 |
submandibular gland primordium | 1.88e-21 | 1 |
parotid gland | 3.45e-21 | 1 |
cheek | 3.45e-21 | 1 |
parotid gland primordium | 3.45e-21 | 1 |
gland of gut | 1.01e-18 | 10 |
bone marrow | 2.45e-12 | 76 |
bone element | 1.99e-11 | 82 |
midface | 2.73e-11 | 2 |
skeletal element | 2.12e-10 | 90 |
immune system | 4.64e-10 | 93 |
hematopoietic system | 1.54e-09 | 98 |
blood island | 1.54e-09 | 98 |
skeletal system | 2.42e-09 | 100 |
oral opening | 7.21e-09 | 22 |
hemolymphoid system | 1.23e-08 | 108 |
mouth | 7.32e-07 | 29 |
stomodeum | 7.32e-07 | 29 |