FFCP PHASE1:Hg19::chr14:23019467..23019489,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:23019467..23019489,+
|short_description=p@chr14:23019467..23019489,+
|description=CAGE_peak_at_chr14:23019467..23019489,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:23019467..23019489,+ | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_at_chr14:23019467..23019489,+ | |||
|id=chr14:23019467..23019489,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.58e-16!53;CL:0000051!3.58e-16!53;CL:0000838!7.81e-15!52;CL:0000084!4.05e-09!25;CL:0000827!4.05e-09!25;CL:0000708!4.17e-09!3;CL:0000039!1.96e-07!7;CL:0000586!1.96e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.68e-22;7!CL:0000586;2.68e-22;7!CL:0000346;8.86e-07;3!CL:1000428;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.78e-22,7;CL:0000586,2.78e-22,7;CL:0000346,8.62e-07,3;CL:1000428,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.02e-16;10!UBERON:0005564;8.02e-16;10 | |||
|ontology_enrichment_disease=DOID:2531!1.28e-10!51;DOID:0060083!1.28e-10!51;DOID:1240!4.99e-08!39;DOID:0060058!3.35e-07!10;DOID:74!6.23e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:2355;9.48e-18;1!DOID:74;1.51e-09;2!DOID:1036;3.55e-09;8!DOID:0060058;1.62e-07;10!DOID:3095;1.64e-07;22!DOID:2994;1.64e-07;22!DOID:2531;5.88e-07;51!DOID:0060083;5.88e-07;51!DOID:1240;7.87e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.03e-17,1;DOID:2531,1.88e-11,51;DOID:0060083,1.88e-11,51;DOID:74,1.57e-09,2;DOID:1036,3.55e-09,8;DOID:0060058,1.57e-07,10;DOID:3095,1.66e-07,22;DOID:2994,1.66e-07,22;DOID:1240,4.50e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003210!4.17e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.33e-19;8!UBERON:0003135;1.91e-14;11!UBERON:0000991;7.62e-08;21!UBERON:0003101;1.64e-07;22!UBERON:0000079;1.64e-07;22!UBERON:0002106;8.86e-07;3!UBERON:0000412;8.86e-07;3!UBERON:0001992;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.37e-19,8;UBERON:0003135,1.96e-14,11;UBERON:0000991,7.71e-08,21;UBERON:0009196,7.71e-08,21;UBERON:0009117,7.71e-08,21;UBERON:0005564,7.71e-08,21;UBERON:0004176,1.66e-07,22;UBERON:0003101,1.66e-07,22;UBERON:0000079,1.66e-07,22;UBERON:0002106,8.15e-07,3;UBERON:0004854,8.15e-07,3;UBERON:0009034,8.15e-07,3;UBERON:0002095,8.15e-07,3;UBERON:0004782,8.15e-07,3;UBERON:0003281,8.15e-07,3;UBERON:0009664,8.15e-07,3;UBERON:0002296,8.15e-07,3;UBERON:0005602,8.15e-07,3;UBERON:0001179,8.15e-07,3;UBERON:0006293,8.15e-07,3;UBERON:0000412,8.62e-07,3;UBERON:0001992,8.62e-07,3 | |||
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| ||
|short_description=p@chr14:23019467..23019489,+ | |||
}} | }} |
Latest revision as of 19:15, 24 July 2015
Short description: | p@chr14:23019467..23019489, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23019467..23019489, + |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.78e-22 | 7 |
germ cell | 2.78e-22 | 7 |
hair follicle dermal papilla cell | 8.62e-07 | 3 |
stem cell of epidermis | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.37e-19 | 8 |
male reproductive organ | 1.96e-14 | 11 |
gonad | 7.71e-08 | 21 |
indifferent external genitalia | 7.71e-08 | 21 |
indifferent gonad | 7.71e-08 | 21 |
gonad primordium | 7.71e-08 | 21 |
external genitalia | 1.66e-07 | 22 |
male organism | 1.66e-07 | 22 |
male reproductive system | 1.66e-07 | 22 |
spleen | 8.15e-07 | 3 |
gastrointestinal system mesentery | 8.15e-07 | 3 |
stomach region | 8.15e-07 | 3 |
mesentery | 8.15e-07 | 3 |
gastrointestinal system serosa | 8.15e-07 | 3 |
mesentery of stomach | 8.15e-07 | 3 |
gut mesentery | 8.15e-07 | 3 |
dorsal mesentery | 8.15e-07 | 3 |
dorsal mesogastrium | 8.15e-07 | 3 |
peritoneal cavity | 8.15e-07 | 3 |
spleen primordium | 8.15e-07 | 3 |
dermal papilla | 8.62e-07 | 3 |
papillary layer of dermis | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.03e-17 | 1 |
hematologic cancer | 1.88e-11 | 51 |
immune system cancer | 1.88e-11 | 51 |
hematopoietic system disease | 1.57e-09 | 2 |
chronic leukemia | 3.55e-09 | 8 |
lymphoma | 1.57e-07 | 10 |
germ cell and embryonal cancer | 1.66e-07 | 22 |
germ cell cancer | 1.66e-07 | 22 |
leukemia | 4.50e-07 | 39 |